FFCP PHASE1:Hg19::chr6:45295874..45295877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=860 | |EntrezGene=860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10472 | |HGNC=10472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000483377_5end | |association_with_transcript=-16bp_to_ENST00000483377_5end | ||
|cluster_id=chr6:45295874..45295877,+ | |||
|coexpression_cluster_id=C77 | |coexpression_cluster_id=C77 | ||
|description=CAGE_peak_47_at_RUNX2_5end | |description=CAGE_peak_47_at_RUNX2_5end | ||
|id=chr6:45295874..45295877,+ | |id=chr6:45295874..45295877,+ | ||
|ontology_enrichment_celltype=CL:0002603!1.07e-20!3;CL:0000128!2.10e-15!7;CL:0000126!2.10e-15!7;CL:0000127!2.10e-15!7;CL:0002453!2.10e-15!7;CL:0002556!2.34e-10!6;CL:0000064!7.18e-10!3;CL:0005012!7.18e-10!3;CL:0000067!7.18e-10!3;CL:0002304!7.18e-10!3;CL:0000243!1.53e-09!15;CL:0000125!1.53e-09!15;CL:0000030!1.53e-09!15;CL:0000339!1.53e-09!15;CL:0000095!1.63e-08!17;CL:0000123!1.63e-08!17;CL:0002174!2.71e-08!1;CL:0000501!2.71e-08!1 | |ontology_enrichment_celltype=CL:0002603!1.07e-20!3;CL:0000128!2.10e-15!7;CL:0000126!2.10e-15!7;CL:0000127!2.10e-15!7;CL:0002453!2.10e-15!7;CL:0002556!2.34e-10!6;CL:0000064!7.18e-10!3;CL:0005012!7.18e-10!3;CL:0000067!7.18e-10!3;CL:0002304!7.18e-10!3;CL:0000243!1.53e-09!15;CL:0000125!1.53e-09!15;CL:0000030!1.53e-09!15;CL:0000339!1.53e-09!15;CL:0000095!1.63e-08!17;CL:0000123!1.63e-08!17;CL:0002174!2.71e-08!1;CL:0000501!2.71e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.75e-66;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.16e-54,11;CL:0000375,2.16e-54,11;CL:0000335,2.16e-54,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.16e-54;11 | |||
|ontology_enrichment_disease=DOID:5662!5.79e-08!1 | |ontology_enrichment_disease=DOID:5662!5.79e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!1.26e-10!6;UBERON:0006215!1.26e-10!6;UBERON:0001758!2.34e-10!6;UBERON:0003672!2.34e-10!6;UBERON:0001778!7.18e-10!3;UBERON:0001775!7.18e-10!3;UBERON:0001736!2.52e-08!1;UBERON:0006298!2.52e-08!1;UBERON:0001282!3.58e-08!1;UBERON:0009842!3.58e-08!1;UBERON:0003704!3.58e-08!1;UBERON:0001171!3.58e-08!1;UBERON:0001172!3.58e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000488!1.30e-07!4;UBERON:0002680!3.08e-07!9;UBERON:0001895!3.08e-07!9;UBERON:0010092!3.08e-07!9 | |ontology_enrichment_uberon=UBERON:0002037!1.26e-10!6;UBERON:0006215!1.26e-10!6;UBERON:0001758!2.34e-10!6;UBERON:0003672!2.34e-10!6;UBERON:0001778!7.18e-10!3;UBERON:0001775!7.18e-10!3;UBERON:0001736!2.52e-08!1;UBERON:0006298!2.52e-08!1;UBERON:0001282!3.58e-08!1;UBERON:0009842!3.58e-08!1;UBERON:0003704!3.58e-08!1;UBERON:0001171!3.58e-08!1;UBERON:0001172!3.58e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000488!1.30e-07!4;UBERON:0002680!3.08e-07!9;UBERON:0001895!3.08e-07!9;UBERON:0010092!3.08e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;8.86e-34;18!UBERON:0004765;8.76e-24;26!UBERON:0001434;1.59e-17;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.31e-08,82;UBERON:0004765,1.43e-07,90;UBERON:0001434,6.45e-07,100 | |||
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|short_description=p47@RUNX2 | |short_description=p47@RUNX2 | ||
}} | }} |
Latest revision as of 00:59, 19 September 2015
Short description: | p47@RUNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_RUNX2_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | -16bp_to_ENST00000483377_5end |
EntrezGene: | RUNX2 |
HGNC: | 10472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.16e-54 | 11 |
osteoprogenitor cell | 2.16e-54 | 11 |
mesenchyme condensation cell | 2.16e-54 | 11 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.31e-08 | 82 |
skeletal element | 1.43e-07 | 90 |
skeletal system | 6.45e-07 | 100 |