FFCP PHASE1:Hg19::chr8:74209403..74209419,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157506 | |EntrezGene=157506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19975 | |HGNC=19975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_uc003xzj.2_5end | |association_with_transcript=64bp_to_uc003xzj.2_5end | ||
|cluster_id=chr8:74209403..74209419,+ | |||
|description=CAGE_peak_16_at_RDH10_5end | |description=CAGE_peak_16_at_RDH10_5end | ||
|id=chr8:74209403..74209419,+ | |id=chr8:74209403..74209419,+ | ||
|ontology_enrichment_celltype=CL:0000136!2.04e-08!15 | |ontology_enrichment_celltype=CL:0000136!2.04e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.42e-26;13!CL:0002541;8.43e-14;3!CL:0000083;8.43e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.26e-22,15;CL:0002541,7.42e-14,3;CL:0000083,9.99e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;4.35e-11;1!DOID:10165;4.35e-11;1!DOID:1798;4.35e-11;1!DOID:1793;8.43e-11;4!DOID:3371;1.10e-10;1!DOID:4549;1.10e-10;1!DOID:5861;1.10e-10;1!DOID:6496;1.10e-10;1!DOID:170;1.75e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.14e-11,1;DOID:10165,6.14e-11,1;DOID:1798,6.14e-11,1;DOID:3371,7.46e-11,1;DOID:4549,7.46e-11,1;DOID:5861,7.46e-11,1;DOID:6496,7.46e-11,1;DOID:1793,9.99e-11,4;DOID:170,1.96e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004921!4.50e-11!129;UBERON:0004185!4.50e-11!129;UBERON:0005409!2.80e-10!35;UBERON:0002367!1.59e-09!11;UBERON:0010147!1.59e-09!11;UBERON:0009846!1.59e-09!11;UBERON:0003353!1.59e-09!11;UBERON:0004902!1.59e-09!11;UBERON:0003820!1.59e-09!11;UBERON:0009847!1.59e-09!11;UBERON:0002108!2.50e-09!14;UBERON:0001007!6.08e-09!155;UBERON:0001555!6.08e-09!155;UBERON:0007026!6.08e-09!155;UBERON:0003937!1.45e-08!12;UBERON:0005399!1.45e-08!12;UBERON:0004119!2.05e-08!169;UBERON:0000925!2.05e-08!169;UBERON:0006595!2.05e-08!169;UBERON:0000160!2.78e-08!27;UBERON:0002114!4.00e-07!12;UBERON:0000162!4.54e-07!14;UBERON:0001353!4.54e-07!14;UBERON:0000163!4.54e-07!14;UBERON:0006866!4.54e-07!14;UBERON:0000164!4.54e-07!14;UBERON:0000931!4.54e-07!14;UBERON:0000077!5.80e-07!130 | |ontology_enrichment_uberon=UBERON:0004921!4.50e-11!129;UBERON:0004185!4.50e-11!129;UBERON:0005409!2.80e-10!35;UBERON:0002367!1.59e-09!11;UBERON:0010147!1.59e-09!11;UBERON:0009846!1.59e-09!11;UBERON:0003353!1.59e-09!11;UBERON:0004902!1.59e-09!11;UBERON:0003820!1.59e-09!11;UBERON:0009847!1.59e-09!11;UBERON:0002108!2.50e-09!14;UBERON:0001007!6.08e-09!155;UBERON:0001555!6.08e-09!155;UBERON:0007026!6.08e-09!155;UBERON:0003937!1.45e-08!12;UBERON:0005399!1.45e-08!12;UBERON:0004119!2.05e-08!169;UBERON:0000925!2.05e-08!169;UBERON:0006595!2.05e-08!169;UBERON:0000160!2.78e-08!27;UBERON:0002114!4.00e-07!12;UBERON:0000162!4.54e-07!14;UBERON:0001353!4.54e-07!14;UBERON:0000163!4.54e-07!14;UBERON:0006866!4.54e-07!14;UBERON:0000164!4.54e-07!14;UBERON:0000931!4.54e-07!14;UBERON:0000077!5.80e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;1.01e-15;10!UBERON:0003124;8.43e-14;3!UBERON:0000920;8.43e-14;3!UBERON:0002075;8.06e-09;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,9.74e-16,10;UBERON:0000920,7.42e-14,3;UBERON:0002075,7.90e-09,18 | |||
|phase1_expression=0,0.428201047781966,0.986680828671798,0,1.34088328328186,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,0,0,0,0,0,0,2.88662684050547,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0.68888668898764,0.182091168006717,1.04899531967539,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.769350375349168,0.328014645699706,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,1.43612231055635,2.39024218228418,1.5950057986596,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,1.99396161812156,0.661983911750998,0,2.38944859545918,0.569219092059585,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0.193978032976839,1.76512253383001,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0.432271251462318,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.236349546921671,0.412079291905832,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,2.1760712134779,1.7548292581589,2.14441903734423,2.95085367638824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0.171488009437418,0,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0.47775168788705,1.00067161847319,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.223710863595585,1.07965256976767,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0.308696632431779,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0.730336388246517,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.320182037633146,0,4.7607357116491,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.428201047781966,0.986680828671798,0,1.34088328328186,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,0,0,0,0,0,0,2.88662684050547,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0.68888668898764,0.182091168006717,1.04899531967539,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.769350375349168,0.328014645699706,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,1.43612231055635,2.39024218228418,1.5950057986596,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,1.99396161812156,0.661983911750998,0,2.38944859545918,0.569219092059585,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0.193978032976839,1.76512253383001,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0.432271251462318,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.236349546921671,0.412079291905832,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,2.1760712134779,1.7548292581589,2.14441903734423,2.95085367638824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0.171488009437418,0,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0.47775168788705,1.00067161847319,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.223710863595585,1.07965256976767,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0.308696632431779,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0.730336388246517,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.320182037633146,0,4.7607357116491,0,0,0,0,0.201273793591026,0 | ||
|short_description=p16@RDH10 | |short_description=p16@RDH10 | ||
}} | }} |
Latest revision as of 01:57, 19 September 2015
Short description: | p16@RDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RDH10_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_uc003xzj.2_5end |
EntrezGene: | RDH10 |
HGNC: | 19975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.26e-22 | 15 |
chorionic membrane mesenchymal stem cell | 7.42e-14 | 3 |
epithelial cell of pancreas | 9.99e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas | 9.74e-16 | 10 |
egg chorion | 7.42e-14 | 3 |
viscus | 7.90e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.14e-11 | 1 |
endocrine pancreas cancer | 6.14e-11 | 1 |
pancreatic endocrine carcinoma | 6.14e-11 | 1 |
chondrosarcoma | 7.46e-11 | 1 |
extraosseous chondrosarcoma | 7.46e-11 | 1 |
myxoid chondrosarcoma | 7.46e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 7.46e-11 | 1 |
pancreatic cancer | 9.99e-11 | 4 |
endocrine gland cancer | 1.96e-07 | 6 |