FFCP PHASE1:Hg19::chr18:24129301..24129313,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:24129301..24129313,-
|short_description=p15@KCTD1
|description=CAGE_peak_15_at_KCTD1_5end
|association_with_transcript=85bp_to_ENST00000408011,NM_00113620...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284252 | |EntrezGene=284252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18249 | |HGNC=18249 | ||
|TSSclassifier=strong | |||
|UniProt=Q719H9 | |UniProt=Q719H9 | ||
|association_with_transcript=85bp_to_ENST00000408011,NM_001136205,uc002kvw.2_5end | |||
|cluster_id=chr18:24129301..24129313,- | |||
|description=CAGE_peak_15_at_KCTD1_5end | |||
|id=chr18:24129301..24129313,- | |||
|ontology_enrichment_celltype=CL:0002076!6.59e-16!43;CL:0000223!7.46e-13!59;CL:0000622!8.45e-09!5;CL:0002231!1.31e-07!3;CL:0000154!2.60e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.47e-09;3!CL:0002623;1.47e-09;3!CL:0002327;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.54e-09,3;CL:0002623,1.67e-09,3;CL:0002327,1.69e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.89e-11;10!UBERON:0007687;4.89e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;6.72e-26;1!DOID:3149;6.72e-26;1!DOID:3451;1.14e-13;2!DOID:4159;1.14e-13;2!DOID:0060122;1.14e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.26e-25,1;DOID:3149,1.26e-25,1;DOID:3451,1.55e-13,2;DOID:4159,1.55e-13,2;DOID:0060122,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.25e-10!35;UBERON:0002530!1.05e-07!59;UBERON:0000153!1.26e-07!129;UBERON:0007811!1.26e-07!129;UBERON:0000062!6.59e-07!511;UBERON:0000033!6.83e-07!123;UBERON:0004121!9.22e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;6.72e-26;1!UBERON:0000014;1.43e-25;4!UBERON:0001044;2.01e-17;6!UBERON:0003293;2.01e-17;6!UBERON:0003294;2.01e-17;6!UBERON:0010047;2.01e-17;6!UBERON:0003408;2.01e-17;6!UBERON:0000167;2.01e-17;6!UBERON:0000161;2.19e-12;19!UBERON:0000166;2.19e-12;19!UBERON:0001949;1.47e-09;3!UBERON:0000165;1.28e-08;28!UBERON:0001041;5.00e-08;14!UBERON:0001911;1.75e-07;4!UBERON:0002365;2.64e-07;31!UBERON:0002330;2.64e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.58e-26,1;UBERON:0000014,1.43e-25,4;UBERON:0001044,2.01e-17,6;UBERON:0003293,2.01e-17,6;UBERON:0003294,2.01e-17,6;UBERON:0010047,2.01e-17,6;UBERON:0000167,2.01e-17,6;UBERON:0003408,7.30e-11,10;UBERON:0000166,8.77e-11,22;UBERON:0001949,1.54e-09,3;UBERON:0000165,2.45e-08,29;UBERON:0000930,2.45e-08,29;UBERON:0002365,7.53e-08,31;UBERON:0002330,7.53e-08,31;UBERON:0001911,1.69e-07,4;UBERON:0005333,1.69e-07,4;UBERON:0008425,1.69e-07,4;UBERON:0005311,1.69e-07,4;UBERON:0000161,7.83e-07,36 | |||
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| ||
|short_description=p15@KCTD1 | |||
}} | }} |
Latest revision as of 02:06, 19 September 2015
Short description: | p15@KCTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_KCTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_ENST00000408011, NM_001136205, uc002kvw.2_5end |
EntrezGene: | KCTD1 |
HGNC: | 18249 |
UniProt: | Q719H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.54e-09 | 3 |
acinar cell of salivary gland | 1.67e-09 | 3 |
mammary gland epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
surface | 3.58e-26 | 1 |
zone of skin | 1.43e-25 | 4 |
saliva-secreting gland | 2.01e-17 | 6 |
gland of oral region | 2.01e-17 | 6 |
gland of foregut | 2.01e-17 | 6 |
oral gland | 2.01e-17 | 6 |
oral cavity | 2.01e-17 | 6 |
gland of gut | 7.30e-11 | 10 |
oral opening | 8.77e-11 | 22 |
gingival epithelium | 1.54e-09 | 3 |
mouth | 2.45e-08 | 29 |
stomodeum | 2.45e-08 | 29 |
exocrine gland | 7.53e-08 | 31 |
exocrine system | 7.53e-08 | 31 |
mammary gland | 1.69e-07 | 4 |
mammary bud | 1.69e-07 | 4 |
mammary ridge | 1.69e-07 | 4 |
mammary placode | 1.69e-07 | 4 |
orifice | 7.83e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.26e-25 | 1 |
keratoacanthoma | 1.26e-25 | 1 |
skin carcinoma | 1.55e-13 | 2 |
skin cancer | 1.55e-13 | 2 |
integumentary system cancer | 1.55e-13 | 2 |