FFCP PHASE1:Hg19::chr11:64527390..64527404,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:64527390..64527404,-
|short_description=p3@PYGM
|description=CAGE_peak_3_at_PYGM_5end
|association_with_transcript=41bp_to_ENST00000377432,ENST00000540450...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5837 | |EntrezGene=5837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9726 | |HGNC=9726 | ||
|UniProt=A6NDY6, | |TSSclassifier=strong | ||
|UniProt=A6NDY6,F5GZH7 | |||
|association_with_transcript=41bp_to_ENST00000377432,ENST00000540450_5end | |||
|cluster_id=chr11:64527390..64527404,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_3_at_PYGM_5end | |||
|id=chr11:64527390..64527404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.55e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.23e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-51!115;UBERON:0003075!5.13e-18!86;UBERON:0007284!5.13e-18!86;UBERON:0002346!1.28e-16!90;UBERON:0005743!4.84e-16!86;UBERON:0000073!2.33e-14!94;UBERON:0001016!2.33e-14!94;UBERON:0001049!1.38e-13!57;UBERON:0005068!1.38e-13!57;UBERON:0006241!1.38e-13!57;UBERON:0007135!1.38e-13!57;UBERON:0001017!5.82e-13!82;UBERON:0002616!8.74e-12!59;UBERON:0003056!3.07e-11!61;UBERON:0000955!2.80e-10!69;UBERON:0006238!2.80e-10!69;UBERON:0002780!5.25e-10!41;UBERON:0001890!5.25e-10!41;UBERON:0006240!5.25e-10!41;UBERON:0000153!6.41e-10!129;UBERON:0007811!6.41e-10!129;UBERON:0003080!1.26e-09!42;UBERON:0004121!3.02e-09!169;UBERON:0000033!6.55e-09!123;UBERON:0000924!1.03e-08!173;UBERON:0006601!1.03e-08!173;UBERON:0002020!1.95e-08!34;UBERON:0003528!1.95e-08!34;UBERON:0001893!2.45e-08!34;UBERON:0000481!2.46e-08!347;UBERON:0001869!4.18e-08!32;UBERON:0002791!9.02e-08!33;UBERON:0000483!2.31e-07!309;UBERON:0000119!4.09e-07!312;UBERON:0002619!7.16e-07!22;UBERON:0003135!7.50e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.63e-11;2!UBERON:0001630;3.63e-11;2!UBERON:0000341;6.23e-11;2!UBERON:0000966;6.45e-09;5!UBERON:0005388;6.45e-09;5!UBERON:0001802;6.45e-09;5!UBERON:0001723;8.39e-08;3!UBERON:0001033;8.39e-08;3!UBERON:0004151;2.04e-07;3!UBERON:0001781;3.43e-07;3!UBERON:0001782;3.43e-07;3!UBERON:0000948;4.10e-07;22!UBERON:0006947;5.72e-07;3!UBERON:0004054;5.72e-07;3!UBERON:0000020;6.55e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.16e-12,114;UBERON:0005090,3.64e-11,2;UBERON:0001630,3.64e-11,2;UBERON:0000341,5.13e-11,2;UBERON:0001723,8.27e-08,3;UBERON:0001033,8.27e-08,3;UBERON:0010056,8.27e-08,3;UBERON:0000966,1.09e-07,6;UBERON:0005388,1.09e-07,6;UBERON:0001802,1.09e-07,6;UBERON:0004151,2.04e-07,3;UBERON:0001782,2.55e-07,3;UBERON:0005424,2.55e-07,3;UBERON:0006947,4.34e-07,3;UBERON:0004054,4.34e-07,3 | |||
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| ||
|short_description=p3@PYGM | |||
}} | }} |
Latest revision as of 04:19, 19 September 2015
Short description: | p3@PYGM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PYGM_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 41bp_to_ENST00000377432, ENST00000540450_5end |
EntrezGene: | PYGM |
HGNC: | 9726 |
UniProt: | A6NDY6F5GZH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.16e-12 | 114 |
muscle structure | 3.64e-11 | 2 |
muscle organ | 3.64e-11 | 2 |
throat | 5.13e-11 | 2 |
tongue | 8.27e-08 | 3 |
gustatory system | 8.27e-08 | 3 |
future tongue | 8.27e-08 | 3 |
retina | 1.09e-07 | 6 |
photoreceptor array | 1.09e-07 | 6 |
posterior segment of eyeball | 1.09e-07 | 6 |
cardiac chamber | 2.04e-07 | 3 |
pigmented layer of retina | 2.55e-07 | 3 |
presumptive retinal pigmented epithelium | 2.55e-07 | 3 |
male genital duct | 4.34e-07 | 3 |
internal male genitalia | 4.34e-07 | 3 |