FFCP PHASE1:Hg19::chr11:64545945..64545958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7536 | |EntrezGene=7536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12950 | |HGNC=12950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000377387_5end | |association_with_transcript=-4bp_to_ENST00000377387_5end | ||
|cluster_id=chr11:64545945..64545958,- | |||
|description=CAGE_peak_3_at_SF1_5end | |description=CAGE_peak_3_at_SF1_5end | ||
|id=chr11:64545945..64545958,- | |id=chr11:64545945..64545958,- | ||
|ontology_enrichment_celltype=CL:0000738!1.74e-15!140;CL:0000988!1.99e-15!182;CL:0000037!6.86e-15!172;CL:0000566!6.86e-15!172;CL:0000542!1.20e-14!53;CL:0000051!1.20e-14!53;CL:0000838!1.98e-14!52;CL:0002032!2.65e-13!165;CL:0000837!2.65e-13!165;CL:0002087!1.07e-11!119;CL:0002031!7.87e-10!124;CL:0000084!4.90e-08!25;CL:0000827!4.90e-08!25;CL:0000791!5.30e-08!18;CL:0000789!5.30e-08!18;CL:0002420!5.30e-08!18;CL:0002419!5.30e-08!18;CL:0000790!5.30e-08!18 | |ontology_enrichment_celltype=CL:0000738!1.74e-15!140;CL:0000988!1.99e-15!182;CL:0000037!6.86e-15!172;CL:0000566!6.86e-15!172;CL:0000542!1.20e-14!53;CL:0000051!1.20e-14!53;CL:0000838!1.98e-14!52;CL:0002032!2.65e-13!165;CL:0000837!2.65e-13!165;CL:0002087!1.07e-11!119;CL:0002031!7.87e-10!124;CL:0000084!4.90e-08!25;CL:0000827!4.90e-08!25;CL:0000791!5.30e-08!18;CL:0000789!5.30e-08!18;CL:0002420!5.30e-08!18;CL:0002419!5.30e-08!18;CL:0000790!5.30e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.60e-08;53!CL:0000791;9.39e-08;18!CL:0000789;9.39e-08;18!CL:0002419;9.39e-08;18!CL:0000084;2.06e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.15e-15,136;CL:0000988,1.95e-15,177;CL:0000037,5.23e-15,168;CL:0000542,1.20e-14,53;CL:0000051,1.20e-14,53;CL:0000838,1.98e-14,52;CL:0002032,2.07e-13,161;CL:0000837,2.07e-13,161;CL:0002087,7.46e-12,115;CL:0002031,6.01e-10,120;CL:0000084,4.90e-08,25;CL:0000827,4.90e-08,25;CL:0000791,5.30e-08,18;CL:0000789,5.30e-08,18;CL:0002420,5.30e-08,18;CL:0002419,5.30e-08,18;CL:0000790,5.30e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.60e-08;53!CL:0000790;9.39e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@SF1 | |short_description=p3@SF1 | ||
}} | }} |
Latest revision as of 04:32, 19 September 2015
Short description: | p3@SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000377387_5end |
EntrezGene: | SF1 |
HGNC: | 12950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.15e-15 | 136 |
hematopoietic cell | 1.95e-15 | 177 |
hematopoietic stem cell | 5.23e-15 | 168 |
lymphocyte | 1.20e-14 | 53 |
common lymphoid progenitor | 1.20e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.98e-14 | 52 |
hematopoietic oligopotent progenitor cell | 2.07e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-13 | 161 |
nongranular leukocyte | 7.46e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 6.01e-10 | 120 |
T cell | 4.90e-08 | 25 |
pro-T cell | 4.90e-08 | 25 |
mature alpha-beta T cell | 5.30e-08 | 18 |
alpha-beta T cell | 5.30e-08 | 18 |
immature T cell | 5.30e-08 | 18 |
mature T cell | 5.30e-08 | 18 |
immature alpha-beta T cell | 5.30e-08 | 18 |