FFCP PHASE1:Hg19::chr4:87856129..87856186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4299 | |EntrezGene=4299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |HGNC=7135 | ||
|TSSclassifier=strong | |||
|UniProt=E7EMS5,E9PBM3,E7ETI4,F5H1V4,B4DTU1,Q14C88,Q05D98 | |UniProt=E7EMS5,E9PBM3,E7ETI4,F5H1V4,B4DTU1,Q14C88,Q05D98 | ||
|association_with_transcript=0bp_to_ENST00000395142,ENST00000395146,ENST00000504956,ENST00000507468,ENST00000541943,NM_001166693,uc003hqh.1,uc011ccx.1,uc011ccy.1,uc011ccz.1_5end | |association_with_transcript=0bp_to_ENST00000395142,ENST00000395146,ENST00000504956,ENST00000507468,ENST00000541943,NM_001166693,uc003hqh.1,uc011ccx.1,uc011ccy.1,uc011ccz.1_5end | ||
|cluster_id=chr4:87856129..87856186,+ | |||
|description=CAGE_peak_1_at_AFF1_5end | |description=CAGE_peak_1_at_AFF1_5end | ||
|id=chr4:87856129..87856186,+ | |id=chr4:87856129..87856186,+ | ||
|ontology_enrichment_celltype=CL:0000557!5.54e-11!71;CL:0000839!1.11e-09!70;CL:0002194!8.29e-09!63;CL:0000576!8.29e-09!63;CL:0000040!8.29e-09!63;CL:0000559!8.29e-09!63;CL:0002009!9.16e-09!65;CL:0000763!4.06e-08!112;CL:0000049!4.06e-08!112;CL:0000766!1.85e-07!76 | |ontology_enrichment_celltype=CL:0000557!5.54e-11!71;CL:0000839!1.11e-09!70;CL:0002194!8.29e-09!63;CL:0000576!8.29e-09!63;CL:0000040!8.29e-09!63;CL:0000559!8.29e-09!63;CL:0002009!9.16e-09!65;CL:0000763!4.06e-08!112;CL:0000049!4.06e-08!112;CL:0000766!1.85e-07!76 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.05e-10,67;CL:0000839,4.03e-09,66;CL:0002194,2.96e-08,59;CL:0000576,2.96e-08,59;CL:0000040,2.96e-08,59;CL:0000559,2.96e-08,59;CL:0002009,3.27e-08,61;CL:0000763,1.32e-07,108;CL:0000049,1.32e-07,108;CL:0000766,6.17e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.53e-14!115;UBERON:0002405!2.96e-10!115;UBERON:0002371!2.98e-09!80;UBERON:0002193!7.17e-09!112;UBERON:0002390!2.69e-07!102;UBERON:0003061!2.69e-07!102;UBERON:0001474!5.05e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.12e-14,114;UBERON:0002405,7.14e-11,93;UBERON:0002371,1.07e-08,76;UBERON:0002193,2.44e-08,108;UBERON:0002390,8.53e-07,98;UBERON:0003061,8.53e-07,98 | |||
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66436915496 | ||
|short_description=p1@AFF1 | |short_description=p1@AFF1 | ||
}} | }} |
Latest revision as of 04:34, 19 September 2015
Short description: | p1@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AFF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395142, ENST00000395146, ENST00000504956, ENST00000507468, ENST00000541943, NM_001166693, uc003hqh.1, uc011ccx.1, uc011ccy.1, uc011ccz.1_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | E7EMS5E9PBM3E7ETI4F5H1V4B4DTU1Q14C88Q05D98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.05e-10 | 67 |
myeloid lineage restricted progenitor cell | 4.03e-09 | 66 |
monopoietic cell | 2.96e-08 | 59 |
monocyte | 2.96e-08 | 59 |
monoblast | 2.96e-08 | 59 |
promonocyte | 2.96e-08 | 59 |
macrophage dendritic cell progenitor | 3.27e-08 | 61 |
myeloid cell | 1.32e-07 | 108 |
common myeloid progenitor | 1.32e-07 | 108 |
myeloid leukocyte | 6.17e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.12e-14 | 114 |
immune system | 7.14e-11 | 93 |
bone marrow | 1.07e-08 | 76 |
hemolymphoid system | 2.44e-08 | 108 |
hematopoietic system | 8.53e-07 | 98 |
blood island | 8.53e-07 | 98 |