FFCP PHASE1:Hg19::chr5:90675927..90675951,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:90675927..90675951,-
|short_description=p5@ARRDC3
|description=CAGE_peak_5_at_ARRDC3_5end
|association_with_transcript=16bp_to_ENST00000503192_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57561 | |EntrezGene=57561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29263 | |HGNC=29263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000503192_5end | |||
|cluster_id=chr5:90675927..90675951,- | |||
|description=CAGE_peak_5_at_ARRDC3_5end | |||
|id=chr5:90675927..90675951,- | |||
|ontology_enrichment_celltype=CL:0000738!2.53e-19!140;CL:0002031!3.59e-18!124;CL:0000037!1.28e-17!172;CL:0000566!1.28e-17!172;CL:0002087!1.49e-17!119;CL:0002032!3.93e-17!165;CL:0000837!3.93e-17!165;CL:0000988!1.25e-16!182;CL:0000542!7.57e-14!53;CL:0000051!7.57e-14!53;CL:0000838!9.97e-14!52;CL:0000791!7.44e-09!18;CL:0000789!7.44e-09!18;CL:0002420!7.44e-09!18;CL:0002419!7.44e-09!18;CL:0000790!7.44e-09!18;CL:0000084!3.97e-08!25;CL:0000827!3.97e-08!25;CL:0002057!2.26e-07!42;CL:0000766!2.82e-07!76;CL:0000839!3.43e-07!70;CL:0000860!6.66e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.24e-14;18!CL:0000789;1.24e-14;18!CL:0002419;1.24e-14;18!CL:0000542;4.34e-11;53!CL:0000084;1.02e-10;25!CL:0000624;1.67e-09;6!CL:0000236;1.60e-08;13!CL:0000625;2.29e-08;11!CL:0002087;9.27e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.04e-25,136;CL:0002031,6.95e-23,120;CL:0000037,1.97e-22,168;CL:0002032,1.93e-21,161;CL:0000837,1.93e-21,161;CL:0000988,4.55e-21,177;CL:0002087,1.18e-19,115;CL:0000838,7.96e-18,52;CL:0000542,2.62e-17,53;CL:0000051,2.62e-17,53;CL:0000791,4.22e-15,18;CL:0000789,4.22e-15,18;CL:0002420,4.22e-15,18;CL:0002419,4.22e-15,18;CL:0000790,4.22e-15,18;CL:0000084,6.12e-11,25;CL:0000827,6.12e-11,25;CL:0000624,8.89e-10,6;CL:0000766,2.58e-09,72;CL:0000625,1.30e-08,11;CL:0000236,6.79e-08,14;CL:0000839,7.97e-08,66;CL:0000763,2.15e-07,108;CL:0000049,2.15e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;1.24e-14;18!CL:0000051;4.34e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0.940364164434263,0,0.273748850145768,0.125542639594803,1.60468152070698,1.14940825229924,0.787107813136792,3.14691421479123,11.1310525448192,4.64448369948228,0,0,0.369754010166788,0.542270404062111,0.568676929949686,0.293600439334847,6.64794490238253,6.81851121398482,5.4252717678963,0.223915474239924,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,0,0.309706370895104,0.575384784644301,1.5369642391746,0.47296445977717,2.06847408441971,0.645484683583826,0,1.31769637679823,1.09162460023138,0.224723484445085,0.612167784741805,0.962787081228281,0.639337125799041,0.659702600373432,1.59570926097305,0.852449501065388,1.7412554317715,2.26954089876456,0,0.251248665256743,1.0429658368404,0.868755378820466,2.42159801053347,1.10483290796269,2.21523671208619,0.633765858935825,1.27562579979026,0.628975936525128,1.23561494261145,0.150176892841506,1.28580469357664,0,0.39783335439818,0.365328307529268,0,4.36910889009705,8.00558328477199,0.426730222566507,3.2031678962881,1.72425731986345,1.32208974556972,2.86216126360609,3.98449078376614,4.11066032559657,4.58727873750275,2.64342657158052,1.68152568894461,1.05353633910031,3.34406609193516,5.89516144123747,4.11202997999018,1.67186495390678,3.91106719960308,4.2610302516126,5.84480185223734,0.779873198196215,1.76763544484902,2.43687284041983,2.43723477388514,1.28091319725675,0.520237390239513,1.31550323682941,0.276350017785848,0.869409257205157,2.52087157375503,1.60524496853828,2.09071047609954,0.793165398882963,2.68254345521345,3.09264700934367,4.04831507231205,1.91139248594458,3.25541726928209,3.8018081777935,0.752875595388864,0.639933055772092,0,1.65744076430812,3.28451198768419,8.66908995866349,12.3022490060413,13.1790207533347,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.443458794925128,0.43917392846563,0.654895377488563,0,0,0.324547393654683,0,0.132957960518865,1.43094374583205,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,2.63560834872127,3.87780264148325,0,0.993943903390637,0.379891534993739,0.662045904066094,0.286836620748814,0.709336764396714,0,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0,0.368502951935304,0.206651562351531,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0.45071417671979,0,0,0,0.211931901159562,0.600182192168805,0,0.772921620136887,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.368199594569197,0,0.355009592516614,0,0.67824236924195,0,0,0,0.243947412259191,0,0.464775771478074,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0,0.723033089650446,0,0,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,2.94017422771084,0,0,1.18157981336281,1.32438929824395,0.491953754172454,0,0.219500570817251,0,0.100528972411631,0,0,1.03993478527958,0,0.115930404975077,0.352226082707465,0,0.462985512576611,0,1.58040879591855,1.71697232418975,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0,0,2.95597942737566,0.528290604079356,2.69526550203004,8.2148373447668,2.90357596880674,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.579125226670317,0.410952645100767,0.537182889719687,0.336255431980582,7.29013812747131,7.76259269494262,13.2193327368141,0.508189248444927,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0,0,0,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,1.24060815673732,2.5885704098234,0.960548020230999,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0.616838775210622,0.532685175939381,0.0821271560138091,0,0,0.362578348774867,0,0.552485933615378,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0,1.97333888981341,2.0914836081992,0,0,0,0.206082023295445,0.54941678891006,0.41254749960294,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0,0.537101224341368,0.145016693914229,0.426133137080504,0.0890320356467374,0.495854746082934,0.576570202095319,0.510450849978337,0.809262246844399,0,0,0,0,0,0,0,0.429374660225974,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.974853958525138,0,0.272999822815972,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0.655894752046633,0,0.6196469961995,0,0.286822704408103,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,1.04980416073495,0.192444225451024,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0.4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| ||
|short_description=p5@ARRDC3 | |||
}} | }} |
Latest revision as of 05:10, 19 September 2015
Short description: | p5@ARRDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARRDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000503192_5end |
EntrezGene: | ARRDC3 |
HGNC: | 29263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.04e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 6.95e-23 | 120 |
hematopoietic stem cell | 1.97e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.93e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-21 | 161 |
hematopoietic cell | 4.55e-21 | 177 |
nongranular leukocyte | 1.18e-19 | 115 |
lymphoid lineage restricted progenitor cell | 7.96e-18 | 52 |
lymphocyte | 2.62e-17 | 53 |
common lymphoid progenitor | 2.62e-17 | 53 |
mature alpha-beta T cell | 4.22e-15 | 18 |
alpha-beta T cell | 4.22e-15 | 18 |
immature T cell | 4.22e-15 | 18 |
mature T cell | 4.22e-15 | 18 |
immature alpha-beta T cell | 4.22e-15 | 18 |
T cell | 6.12e-11 | 25 |
pro-T cell | 6.12e-11 | 25 |
CD4-positive, alpha-beta T cell | 8.89e-10 | 6 |
myeloid leukocyte | 2.58e-09 | 72 |
CD8-positive, alpha-beta T cell | 1.30e-08 | 11 |
B cell | 6.79e-08 | 14 |
myeloid lineage restricted progenitor cell | 7.97e-08 | 66 |
myeloid cell | 2.15e-07 | 108 |
common myeloid progenitor | 2.15e-07 | 108 |