FFCP PHASE1:Hg19::chr17:26800716..26800725,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9058 | |EntrezGene=9058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10917 | |HGNC=10917 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1L2 | |UniProt=G3V1L2 | ||
|association_with_transcript=-30bp_to_ENST00000459818,ENST00000537681_5end | |association_with_transcript=-30bp_to_ENST00000459818,ENST00000537681_5end | ||
|cluster_id=chr17:26800716..26800725,+ | |||
|coexpression_cluster_id=C3620 | |coexpression_cluster_id=C3620 | ||
|description=CAGE_peak_8_at_SLC13A2_5end | |description=CAGE_peak_8_at_SLC13A2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2 | |ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.19e-12!3;UBERON:0004054!1.19e-12!3;UBERON:0001736!3.40e-10!1;UBERON:0006298!3.40e-10!1;UBERON:0000998!3.71e-10!1;UBERON:0006868!3.71e-10!1;UBERON:0001000!4.44e-10!1;UBERON:0005352!4.44e-10!1;UBERON:0005904!1.03e-09!4;UBERON:0000059!6.37e-08!11;UBERON:0000160!6.81e-08!27;UBERON:0007023!2.08e-07!115;UBERON:0001044!7.05e-07!6;UBERON:0003293!7.05e-07!6;UBERON:0003294!7.05e-07!6;UBERON:0010047!7.05e-07!6;UBERON:0000167!7.05e-07!6 | |ontology_enrichment_uberon=UBERON:0006947!1.19e-12!3;UBERON:0004054!1.19e-12!3;UBERON:0001736!3.40e-10!1;UBERON:0006298!3.40e-10!1;UBERON:0000998!3.71e-10!1;UBERON:0006868!3.71e-10!1;UBERON:0001000!4.44e-10!1;UBERON:0005352!4.44e-10!1;UBERON:0005904!1.03e-09!4;UBERON:0000059!6.37e-08!11;UBERON:0000160!6.81e-08!27;UBERON:0007023!2.08e-07!115;UBERON:0001044!7.05e-07!6;UBERON:0003293!7.05e-07!6;UBERON:0003294!7.05e-07!6;UBERON:0010047!7.05e-07!6;UBERON:0000167!7.05e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.51e-30;17!UBERON:0000059;1.40e-27;11!UBERON:0004921;6.04e-25;33!UBERON:0005409;1.74e-23;22!UBERON:0001155;1.22e-15;9!UBERON:0001555;5.12e-11;54!UBERON:0001052;1.44e-09;4!UBERON:0002108;5.35e-08;4!UBERON:0004907;6.55e-08;5!UBERON:0001007;2.81e-07;81!UBERON:0001044;8.48e-07;6!UBERON:0003293;8.48e-07;6!UBERON:0003294;8.48e-07;6!UBERON:0010047;8.48e-07;6!UBERON:0003408;8.48e-07;6!UBERON:0000167;8.48e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000160;8.51e-30;17!UBERON:0000059;1.40e-27;11!UBERON:0004921;6.04e-25;33!UBERON:0005409;1.74e-23;22!UBERON:0001155;1.22e-15;9!UBERON:0001555;5.12e-11;54!UBERON:0001052;1.44e-09;4!UBERON:0002108;5.35e-08;4!UBERON:0004907;6.55e-08;5!UBERON:0001007;2.81e-07;81!UBERON:0001044;8.48e-07;6!UBERON:0003293;8.48e-07;6!UBERON:0003294;8.48e-07;6!UBERON:0010047;8.48e-07;6!UBERON:0003408;8.48e-07;6!UBERON:0000167;8.48e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.18e-30,17;UBERON:0000059,1.54e-27,11;UBERON:0005409,7.73e-21,25;UBERON:0001155,1.52e-15,9;UBERON:0001052,1.22e-09,4;UBERON:0002108,5.35e-08,4;UBERON:0004907,5.73e-08,5;UBERON:0004921,2.25e-07,118;UBERON:0001044,8.02e-07,6;UBERON:0003293,8.02e-07,6;UBERON:0003294,8.02e-07,6;UBERON:0010047,8.02e-07,6;UBERON:0000167,8.02e-07,6 | |||
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|short_description=p8@SLC13A2 | |short_description=p8@SLC13A2 | ||
}} | }} |
Latest revision as of 06:02, 19 September 2015
Short description: | p8@SLC13A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC13A2_5end |
Coexpression cluster: | C3620_small_salivary_colon_seminal_submaxillary_duodenum_rectum |
Association with transcript: | -30bp_to_ENST00000459818, ENST00000537681_5end |
EntrezGene: | SLC13A2 |
HGNC: | 10917 |
UniProt: | G3V1L2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 9.18e-30 | 17 |
large intestine | 1.54e-27 | 11 |
gastrointestinal system | 7.73e-21 | 25 |
colon | 1.52e-15 | 9 |
rectum | 1.22e-09 | 4 |
small intestine | 5.35e-08 | 4 |
lower digestive tract | 5.73e-08 | 5 |
subdivision of digestive tract | 2.25e-07 | 118 |
saliva-secreting gland | 8.02e-07 | 6 |
gland of oral region | 8.02e-07 | 6 |
gland of foregut | 8.02e-07 | 6 |
oral gland | 8.02e-07 | 6 |
oral cavity | 8.02e-07 | 6 |