FFCP PHASE1:Hg19::chr19:49607884..49607918,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49607884..49607918,+
|short_description=p8@SNRNP70
|description=CAGE_peak_8_at_SNRNP70_5end
|association_with_transcript=-50bp_to_X06814_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6625 | |EntrezGene=6625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11150 | |HGNC=11150 | ||
|TSSclassifier=strong | |||
|UniProt=P08621 | |UniProt=P08621 | ||
|association_with_transcript=-50bp_to_X06814_5end | |||
|cluster_id=chr19:49607884..49607918,+ | |||
|coexpression_cluster_id=C217 | |||
|description=CAGE_peak_8_at_SNRNP70_5end | |||
|id=chr19:49607884..49607918,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.33e-13;2!CL:0000242;1.33e-13;2!CL:0002032;1.39e-07;1!CL:0000557;1.39e-07;1!CL:0000511;3.40e-07;1!CL:0002625;3.40e-07;1!CL:0000228;3.40e-07;1!CL:0002581;3.40e-07;1!CL:0000216;3.40e-07;1!CL:0002372;3.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.38e-13,2;CL:0000511,1.54e-07,1;CL:0002625,1.54e-07,1;CL:0000216,1.54e-07,1;CL:0002581,1.85e-07,1;CL:0000228,2.37e-07,1;CL:0002372,2.37e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;3.40e-07;1!UBERON:0002146;3.40e-07;1!UBERON:0001136;3.40e-07;1!UBERON:0001343;3.40e-07;1!UBERON:0007195;3.40e-07;1!UBERON:0009661;3.40e-07;1!UBERON:0005623;3.40e-07;1!UBERON:0002950;3.40e-07;1!UBERON:0004910;3.40e-07;1!UBERON:0004813;3.40e-07;1!UBERON:0001891;3.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.54e-07,1;UBERON:0001343,1.54e-07,1;UBERON:0004910,1.54e-07,1;UBERON:0005154,1.54e-07,1;UBERON:0005295,1.54e-07,1;UBERON:0004813,1.54e-07,1;UBERON:0005297,1.54e-07,1;UBERON:0005294,1.54e-07,1;UBERON:0010141,1.54e-07,1;UBERON:0005891,1.54e-07,1;UBERON:0002038,3.85e-07,1;UBERON:0009661,3.85e-07,1;UBERON:0002950,3.85e-07,1;UBERON:0001891,3.85e-07,1;UBERON:0009616,3.85e-07,1;UBERON:0010286,3.85e-07,1;UBERON:0002146,4.08e-07,1;UBERON:0005623,4.08e-07,1;UBERON:0007195,4.60e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0,0.919421224478927,0,0.369754010166788,0,0,0.587200878669695,0.553995408531877,0.401088894940283,1.08505435357926,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0.736555271975129,0.632924774881769,0.211255286311942,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,1.31692042387539,0.393419540227666,0.393010762749165,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.802320587350522,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.283604451492204,0,0,0.0654895377488563,0,1.48313777113772,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,0,0.239624855491583,0,1.42636905040718,0,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,3.08454505380579,0,0,0.254876273045038,0,0.447749509444357,0,0.261435451024901,0,0,0,0,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0,0.308097234229289,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.576570202095319,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0.421258456238981,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0.822724546172388,0,0,0,0.213648142254946,0.962479855263359,0.735120647943095,0,0.432807638929335,0.0711418433484141,0.159426272728822,0.199579371432817,0.191505370132367,0.846694330895531,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,1.23087398947712,1.08182271390393,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0.568272293612826,0,0,0.307160702099232,0.994147647766298,0.562677665642051,0,0,0.211125408127993,0,0.276283915531148,0.503865495708552,0,0,0.311039587661807,0.0898683511473268,0,1.02314474045374,0,0,1.11136990144637,0,0.185536196323703,0,1.04171104434093,0.174919999992391,0,0,0.254253650292766,0,3.10269035917318,17.7878814163785,0.347249989866585,0,0.241192877250816,0,0.995213339381022,0.295547618953547,0,0.21787692703798,0,0.230850775511391,0.113942055847001,0.46112780877612,0.0897576444097721,0,0.638002319463839,0.274792780205587,0,0,0,0,0.225595660617181,0,0,0.37950746544837,0.158936578980379,0.421996129056054,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0.992975867626496,0.313932918407225,0,0.853828638089378,0.138674673013139,0.173559738335131,0.0979923974143777,0.0870592065804026,0.34945333648406,0.343972064943233,0.0967563312890851,0.146178634172371,0,0.193978032976839,0.176512253383001,0,0,0,0,0.195551382734803,0,0.21345299473935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| ||
|short_description=p8@SNRNP70 | |||
}} | }} |
Latest revision as of 06:10, 19 September 2015
Short description: | p8@SNRNP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SNRNP70_5end |
Coexpression cluster: | C217_carcinoid_neuroectodermal_mature_mesodermal_colon_acute_occipital |
Association with transcript: | -50bp_to_X06814_5end |
EntrezGene: | SNRNP70 |
HGNC: | 11150 |
UniProt: | P08621 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.38e-13 | 2 |
androgen binding protein secreting cell | 1.54e-07 | 1 |
seminiferous tubule epithelial cell | 1.54e-07 | 1 |
Sertoli cell | 1.54e-07 | 1 |
perirenal preadipocyte | 1.85e-07 | 1 |
multinucleate cell | 2.37e-07 | 1 |
myotube | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.54e-07 | 1 |
seminiferous tubule of testis | 1.54e-07 | 1 |
epithelium of male gonad | 1.54e-07 | 1 |
epithelial cord | 1.54e-07 | 1 |
sex cord | 1.54e-07 | 1 |
seminiferous tubule epithelium | 1.54e-07 | 1 |
testis sex cord | 1.54e-07 | 1 |
genital ridge | 1.54e-07 | 1 |
primitive sex cord of indifferent gonad | 1.54e-07 | 1 |
coelomic epithelium | 1.54e-07 | 1 |
substantia nigra | 3.85e-07 | 1 |
midbrain nucleus | 3.85e-07 | 1 |
regional part of midbrain | 3.85e-07 | 1 |
midbrain | 3.85e-07 | 1 |
presumptive midbrain | 3.85e-07 | 1 |
midbrain neural tube | 3.85e-07 | 1 |
pulmonary valve | 4.08e-07 | 1 |
semi-lunar valve | 4.08e-07 | 1 |
stroma of bone marrow | 4.60e-07 | 1 |