FFCP PHASE1:Hg19::chr10:74653330..74653345,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170392 | |EntrezGene=170392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29953 | |HGNC=29953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWZ8,C9JXV7 | |UniProt=Q8WWZ8,C9JXV7 | ||
|association_with_transcript=0bp_to_ENST00000334011,ENST00000415725,NM_152635,uc001jte.1,uc009xqs.1_5end | |association_with_transcript=0bp_to_ENST00000334011,ENST00000415725,NM_152635,uc001jte.1,uc009xqs.1_5end | ||
|cluster_id=chr10:74653330..74653345,+ | |||
|description=CAGE_peak_3_at_OIT3_5end | |description=CAGE_peak_3_at_OIT3_5end | ||
|id=chr10:74653330..74653345,+ | |id=chr10:74653330..74653345,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.23e-13;1!UBERON:0004140;4.23e-13;1!UBERON:0004872;1.21e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!7.65e-13!26;UBERON:0002106!1.60e-08!3;UBERON:0004854!1.60e-08!3;UBERON:0009034!1.60e-08!3;UBERON:0002095!1.60e-08!3;UBERON:0004782!1.60e-08!3;UBERON:0003281!1.60e-08!3;UBERON:0009664!1.60e-08!3;UBERON:0002296!1.60e-08!3;UBERON:0005602!1.60e-08!3;UBERON:0001179!1.60e-08!3;UBERON:0006293!1.60e-08!3;UBERON:0003978!3.63e-08!3;UBERON:0009751!3.63e-08!3;UBERON:0000946!3.63e-08!3;UBERON:0002523!3.63e-08!3;UBERON:0005983!3.63e-08!3;UBERON:0002165!3.63e-08!3;UBERON:0002062!3.63e-08!3;UBERON:0007280!3.63e-08!3;UBERON:0001896!6.26e-08!3;UBERON:0005290!6.26e-08!3;UBERON:0010096!6.26e-08!3;UBERON:0004177!8.91e-08!7;UBERON:0002426!2.22e-07!1;UBERON:0003831!2.22e-07!1;UBERON:0003898!2.22e-07!1;UBERON:0004830!2.22e-07!1;UBERON:0001774!2.22e-07!1;UBERON:0003830!2.22e-07!1;UBERON:0005175!2.22e-07!1;UBERON:0003897!2.22e-07!1;UBERON:0001103!2.22e-07!1;UBERON:0010084!2.22e-07!1;UBERON:0002107!2.24e-07!19;UBERON:0006925!2.24e-07!19;UBERON:0008836!2.24e-07!19;UBERON:0007029!2.66e-07!1;UBERON:0002368!4.04e-07!35;UBERON:0002135!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.26e-18;49!UBERON:0002426;1.71e-13;1!UBERON:0003831;1.71e-13;1!UBERON:0003898;1.71e-13;1!UBERON:0004830;1.71e-13;1!UBERON:0003830;1.71e-13;1!UBERON:0005175;1.71e-13;1!UBERON:0001774;1.71e-13;1!UBERON:0001103;1.71e-13;1!UBERON:0007029;2.62e-13;1!UBERON:0005090;2.22e-07;2!UBERON:0001630;2.22e-07;2!UBERON:0000341;2.74e-07;2!UBERON:0003127;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.82e-13,1;UBERON:0003831,1.82e-13,1;UBERON:0003898,1.82e-13,1;UBERON:0004830,1.82e-13,1;UBERON:0003830,1.82e-13,1;UBERON:0005175,1.82e-13,1;UBERON:0001774,1.82e-13,1;UBERON:0001103,1.82e-13,1;UBERON:0010084,1.82e-13,1;UBERON:0007029,2.62e-13,1;UBERON:0005090,2.28e-07,2;UBERON:0001630,2.28e-07,2;UBERON:0000341,2.91e-07,2;UBERON:0003127,4.17e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79007586580942,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817309515567294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,2.41860500952215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,4.37139893753226,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,2.8361470708374,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28515976634733,0,0.31037357147929,0,0,1.21270313374932,0,4.44903291410865,0,0,1.66330178273007,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79007586580942,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817309515567294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,2.41860500952215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,4.37139893753226,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,2.8361470708374,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28515976634733,0,0.31037357147929,0,0,1.21270313374932,0,4.44903291410865,0,0,1.66330178273007,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p3@OIT3 | |short_description=p3@OIT3 | ||
}} | }} |
Latest revision as of 06:15, 19 September 2015
Short description: | p3@OIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OIT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334011, ENST00000415725, NM_152635, uc001jte.1, uc009xqs.1_5end |
EntrezGene: | OIT3 |
HGNC: | 29953 |
UniProt: | Q8WWZ8C9JXV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.82e-13 | 1 |
respiratory system muscle | 1.82e-13 | 1 |
skeletal muscle of trunk | 1.82e-13 | 1 |
respiratory system skeletal muscle | 1.82e-13 | 1 |
thoracic segment muscle | 1.82e-13 | 1 |
chest organ | 1.82e-13 | 1 |
muscle of trunk | 1.82e-13 | 1 |
diaphragm | 1.82e-13 | 1 |
future diaphragm | 1.82e-13 | 1 |
surface | 2.62e-13 | 1 |
muscle structure | 2.28e-07 | 2 |
muscle organ | 2.28e-07 | 2 |
throat | 2.91e-07 | 2 |
open tracheal system trachea | 4.17e-07 | 2 |