FFCP PHASE1:Hg19::chr11:64949899..64949941,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:64949899..64949941,+
|short_description=p5@CAPN1
|description=CAGE_peak_5_at_CAPN1_5end
|association_with_transcript=0bp_to_ENST00000527323,ENST0000052769...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=823 | |EntrezGene=823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1476 | |HGNC=1476 | ||
|UniProt=E9PMC6, | |TSSclassifier=strong | ||
|UniProt=E9PMC6,E9PLX0,E9PLC9 | |||
|association_with_transcript=0bp_to_ENST00000527323,ENST00000527699,ENST00000531068,ENST00000533909_5end | |||
|cluster_id=chr11:64949899..64949941,+ | |||
|description=CAGE_peak_5_at_CAPN1_5end | |||
|id=chr11:64949899..64949941,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.33e-28!254;CL:0002076!4.86e-18!43;CL:0000223!4.29e-16!59;CL:0002368!2.62e-08!13;CL:0002251!6.06e-08!21;CL:0002159!1.34e-07!13;CL:0000076!9.34e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.01e-20;42!CL:0002368;1.28e-13;13!CL:0002251;2.86e-12;20!CL:0002159;6.38e-10;14!CL:0002202;2.97e-09;9!CL:0002632;2.97e-09;9!CL:0002322;5.75e-09;5!CL:1000507;1.62e-07;10!CL:1000494;1.62e-07;10!CL:0000039;6.65e-07;7!CL:0000586;6.65e-07;7!CL:0002077;8.10e-07;34!CL:0000244;9.90e-07;4!CL:0000731;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-30,253;CL:0002076,1.70e-26,42;CL:0000223,2.27e-20,58;CL:0002368,1.34e-13,13;CL:0002251,2.39e-12,20;CL:0002159,6.36e-10,14;CL:0002202,2.76e-09,9;CL:0002632,2.76e-09,9;CL:0002322,5.77e-09,5;CL:0002077,9.32e-08,34;CL:1000507,1.24e-07,10;CL:1000494,1.24e-07,10;CL:0000039,7.49e-07,7;CL:0000586,7.49e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;1.75e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.04e-15!106;DOID:1749!1.39e-11!14;DOID:0050687!2.49e-11!143;DOID:299!8.83e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.90e-17;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.67e-17,14;DOID:305,8.97e-12,106;DOID:0050687,6.24e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.49e-14!169;UBERON:0000925!9.49e-14!169;UBERON:0006595!9.49e-14!169;UBERON:0000464!4.06e-12!104;UBERON:0000062!1.97e-11!511;UBERON:0000466!2.03e-11!126;UBERON:0000481!1.05e-10!347;UBERON:0000922!1.17e-10!612;UBERON:0000468!2.43e-10!659;UBERON:0005156!2.55e-10!59;UBERON:0000990!2.55e-10!59;UBERON:0000475!5.72e-10!365;UBERON:0000064!6.10e-10!219;UBERON:0001007!8.72e-10!155;UBERON:0001555!8.72e-10!155;UBERON:0007026!8.72e-10!155;UBERON:0000161!2.25e-09!35;UBERON:0003100!2.39e-09!41;UBERON:0003133!2.85e-09!48;UBERON:0001008!3.62e-09!45;UBERON:0004111!6.28e-09!241;UBERON:0000467!8.98e-09!625;UBERON:0006554!1.01e-08!44;UBERON:0000480!1.19e-08!626;UBERON:0005911!2.07e-08!82;UBERON:0002050!2.25e-08!605;UBERON:0005423!2.25e-08!605;UBERON:0000923!3.99e-08!604;UBERON:0005291!3.99e-08!604;UBERON:0006598!3.99e-08!604;UBERON:0002532!3.99e-08!604;UBERON:0001004!4.65e-08!72;UBERON:0004921!5.48e-08!129;UBERON:0004185!5.48e-08!129;UBERON:0000077!5.90e-08!130;UBERON:0000483!8.56e-08!309;UBERON:0002553!1.02e-07!70;UBERON:0003134!1.52e-07!37;UBERON:0000474!1.52e-07!37;UBERON:0000119!2.13e-07!312;UBERON:0000166!2.76e-07!21;UBERON:0004121!2.84e-07!169;UBERON:0000344!5.27e-07!12;UBERON:0004175!6.57e-07!25;UBERON:0005153!8.51e-07!37;UBERON:0000153!8.94e-07!129;UBERON:0007811!8.94e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;4.67e-08;19!UBERON:0000166;4.67e-08;19!UBERON:0000365;6.20e-08;5!UBERON:0000344;6.25e-08;20!UBERON:0004211;1.62e-07;10!UBERON:0009773;1.62e-07;10!UBERON:0001231;1.62e-07;10!UBERON:0004810;1.62e-07;10!UBERON:0007196;2.00e-07;15!UBERON:0001558;2.00e-07;15!UBERON:0000486;5.96e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.55e-13,160;UBERON:0000925,3.55e-13,160;UBERON:0006595,3.55e-13,160;UBERON:0001004,3.25e-09,74;UBERON:0000161,6.14e-09,36;UBERON:0001008,6.15e-09,48;UBERON:0006554,2.50e-08,47;UBERON:0001007,2.51e-08,145;UBERON:0001555,2.51e-08,145;UBERON:0007026,2.51e-08,145;UBERON:0000344,4.97e-08,20;UBERON:0000365,5.74e-08,5;UBERON:0000166,6.78e-08,22;UBERON:0004810,1.24e-07,10;UBERON:0007196,1.49e-07,15;UBERON:0001558,1.49e-07,15;UBERON:0006555,7.24e-07,16;UBERON:0004819,7.24e-07,16 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,2.21160542851358,9.07141518364156,3.05817920982241,1.84636884759917,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,5.72291245678675,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,6.55731518926576,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.366403487860815,0,0,4.36094052142534,0,0,0.529636723252875,0,0,1.12135520028461,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.23486899728753,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,4.44499962275583,2.45471508531751,5.73609190778008,13.2951339681259,12.4577982222196,11.3870064012128,6.63430752098371,15.3915719034133,7.2995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,1.96781501668982,0.171567810298526,4.7192622725709,5.62008766288098,1.60846355858609,2.12953423864618,0,0,0,0.115930404975077,0,0.288732895522148,0,0.380508304469197,3.95102198979638,0.858486162094873,0,0,0,2.81201501960331,3.19166043577833,3.68615252830205,2.23896306757121,1.74380363108377,8.81780162079986,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.909382714338778,1.66435439510497,2.41912234663744,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.464841513839837,0.362578348774867,9.02279116364782,5.15653538041019,0.229628896329213,0,0.131124414959424,4.51199612907412,2.46449078734127,1.56869953835371,4.38417673959782,0.633309773357254,0,0,0,0,0.270946437543853,1.50506932156456,3.3133915495855,10.8039881160734,1.79099803777743,0,0,0.512900250232778,0,0,0.9273691048295,0,0,2.29706215198469,1.30012049207304,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,2.31398881505369,4.42037154939744,3.31793052485919,3.4393645490887,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0.606547444719948,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,2.4055528181378,12.73574323518,7.62236894029258,0.470719003883896,6.02707521739722,6.73885902670502,6.20802214951346,3.67557440331135,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,7.35120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0.37428108081644,0,0.242721043499027,0,0,1.43246690842614,1.18785872333055,0.921482106297696,0,0.281338832821026,0,0.16480387422676,2.95575571379191,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0,5.66170612228159,1.9692329214317,0,0.789147245095469,0,0,0,0.74214478529481,0,1.82299432759663,0.874599999961957,0,7.73795448341398,2.03402920234213,0.236387681767936,2.41320361269025,0,0,0.885741385813839,0.60298219312704,3.05163472634166,4.20201187738654,5.31985714116385,2.4132393686937,0,7.25003470248737,1.46205491157214,0,2.07507513949254,3.59030577639089,1.3037684630641,0.957003479195758,0.824378340616761,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,2.77495773870551,0.848118428603645,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.937057782901357,0,6.65259704369105,0.242780379534093,0.394584402849391,0,0,0,0,0.207376382794494,0,0,0,0,3.69992409838731,0,9.02510639342681,4.01768829398948,10.9694600291307,3.31980669659857,0,0.0967563312890851,0.0730893170861856,0,5.04342885739781,0.0882561266915003,0.225980740780532,0,0,0.886351143382302,4.88878456837007,0.160317640503067,1.28071796843612,0,0,0.114536596165916,0,0,0.248505071130865,1.88555227693436,0.407712618220842,0,0,0,0.600420288709789,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0,1.16495949527454,0.236349546921671,0.494495150286999,0.404421263125109,0,0,0,0.544813624446302,10.9312140956213,7.01451126645892,10.8014487887588,0.2249738915515,0,0.789744236554321,4.69608562638973,0.315222829196793,0.681909645754975,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,1.68067843270016,1.05786081394152,0.171086837884329,2.81926008926669,0.533937062838473,0,0,0,0,0,6.38341257770182,0,0,0,0,1.09937867375164,0,0.610131324509816,0.751145584238999,0.573409195690071,1.10929051536852,1.30402446176905,0,0,0.151649117541648,0,0,0.468334905806882,2.3187364577732,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.295710299979268,0.477890301491107,0,0,0.414706207840855,0,0,0.150257608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| ||
|short_description=p5@CAPN1 | |||
}} | }} |
Latest revision as of 06:48, 19 September 2015
Short description: | p5@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527323, ENST00000527699, ENST00000531068, ENST00000533909_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | E9PMC6E9PLX0E9PLC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-30 | 253 |
endo-epithelial cell | 1.70e-26 | 42 |
endodermal cell | 2.27e-20 | 58 |
respiratory epithelial cell | 1.34e-13 | 13 |
epithelial cell of alimentary canal | 2.39e-12 | 20 |
general ecto-epithelial cell | 6.36e-10 | 14 |
epithelial cell of tracheobronchial tree | 2.76e-09 | 9 |
epithelial cell of lower respiratory tract | 2.76e-09 | 9 |
embryonic stem cell | 5.77e-09 | 5 |
ecto-epithelial cell | 9.32e-08 | 34 |
kidney tubule cell | 1.24e-07 | 10 |
nephron tubule epithelial cell | 1.24e-07 | 10 |
germ line cell | 7.49e-07 | 7 |
germ cell | 7.49e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.55e-13 | 160 |
endoderm | 3.55e-13 | 160 |
presumptive endoderm | 3.55e-13 | 160 |
respiratory system | 3.25e-09 | 74 |
orifice | 6.14e-09 | 36 |
renal system | 6.15e-09 | 48 |
urinary system structure | 2.50e-08 | 47 |
digestive system | 2.51e-08 | 145 |
digestive tract | 2.51e-08 | 145 |
primitive gut | 2.51e-08 | 145 |
mucosa | 4.97e-08 | 20 |
urothelium | 5.74e-08 | 5 |
oral opening | 6.78e-08 | 22 |
nephron tubule epithelium | 1.24e-07 | 10 |
tracheobronchial tree | 1.49e-07 | 15 |
lower respiratory tract | 1.49e-07 | 15 |
excretory tube | 7.24e-07 | 16 |
kidney epithelium | 7.24e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.67e-17 | 14 |
carcinoma | 8.97e-12 | 106 |
cell type cancer | 6.24e-08 | 143 |