FFCP PHASE1:Hg19::chr8:86089417..86089440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1875 | |EntrezGene=1875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3119 | |HGNC=3119 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000418930_5end | |association_with_transcript=-19bp_to_ENST00000418930_5end | ||
|cluster_id=chr8:86089417..86089440,+ | |||
|description=CAGE_peak_2_at_E2F5_5end | |description=CAGE_peak_2_at_E2F5_5end | ||
|id=chr8:86089417..86089440,+ | |id=chr8:86089417..86089440,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.56e-09!25;CL:0000066!7.59e-08!254 | |ontology_enrichment_celltype=CL:0002319!1.56e-09!25;CL:0000066!7.59e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.03e-11;25 | |ontology_enrichment_celltype_v019=CL:0002319;4.03e-11;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.71e-11,25;CL:0000133,6.70e-08,59;CL:0000066,3.12e-07,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.23e-30!235;DOID:14566!5.01e-30!239;DOID:0050687!6.46e-24!143;DOID:305!2.63e-21!106;DOID:0050686!5.84e-13!137;DOID:3095!1.52e-07!22;DOID:2994!1.52e-07!22 | |ontology_enrichment_disease=DOID:162!1.23e-30!235;DOID:14566!5.01e-30!239;DOID:0050687!6.46e-24!143;DOID:305!2.63e-21!106;DOID:0050686!5.84e-13!137;DOID:3095!1.52e-07!22;DOID:2994!1.52e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.88e-08;22!DOID:2994;2.88e-08;22!DOID:305;3.87e-07;106 | |ontology_enrichment_disease_v019=DOID:3095;2.88e-08;22!DOID:2994;2.88e-08;22!DOID:305;3.87e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.86e-28,235;DOID:14566,8.51e-28,239;DOID:0050687,4.29e-23,143;DOID:305,1.28e-20,106;DOID:0050686,1.31e-11,137;DOID:3095,3.16e-08,22;DOID:2994,3.16e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.22e-09!129;UBERON:0004185!1.22e-09!129;UBERON:0005177!3.60e-09!107;UBERON:0001048!3.69e-09!168;UBERON:0001007!1.14e-08!155;UBERON:0001555!1.14e-08!155;UBERON:0007026!1.14e-08!155;UBERON:0000481!1.14e-07!347;UBERON:0000077!2.35e-07!130;UBERON:0005172!3.26e-07!55;UBERON:0005173!3.26e-07!55;UBERON:0001041!3.41e-07!98 | |ontology_enrichment_uberon=UBERON:0004921!1.22e-09!129;UBERON:0004185!1.22e-09!129;UBERON:0005177!3.60e-09!107;UBERON:0001048!3.69e-09!168;UBERON:0001007!1.14e-08!155;UBERON:0001555!1.14e-08!155;UBERON:0007026!1.14e-08!155;UBERON:0000481!1.14e-07!347;UBERON:0000077!2.35e-07!130;UBERON:0005172!3.26e-07!55;UBERON:0005173!3.26e-07!55;UBERON:0001041!3.41e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.43e-09;49!UBERON:0002113;2.42e-07;24!UBERON:0011143;2.42e-07;24!UBERON:0000489;2.94e-07;29 | |ontology_enrichment_uberon_v019=UBERON:0000922;4.43e-09;49!UBERON:0002113;2.42e-07;24!UBERON:0011143;2.42e-07;24!UBERON:0000489;2.94e-07;29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.91e-09,101;UBERON:0005172,3.94e-08,54;UBERON:0005173,3.94e-08,54;UBERON:0011216,1.73e-07,223;UBERON:0004921,2.38e-07,118 | |||
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| ||
|short_description=p2@E2F5 | |short_description=p2@E2F5 | ||
}} | }} |
Latest revision as of 07:36, 19 September 2015
Short description: | p2@E2F5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_E2F5_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000418930_5end |
EntrezGene: | E2F5 |
HGNC: | 3119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.71e-11 | 25 |
neurectodermal cell | 6.70e-08 | 59 |
epithelial cell | 3.12e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.91e-09 | 101 |
abdomen element | 3.94e-08 | 54 |
abdominal segment element | 3.94e-08 | 54 |
organ system subdivision | 1.73e-07 | 223 |
subdivision of digestive tract | 2.38e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.86e-28 | 235 |
disease of cellular proliferation | 8.51e-28 | 239 |
cell type cancer | 4.29e-23 | 143 |
carcinoma | 1.28e-20 | 106 |
organ system cancer | 1.31e-11 | 137 |
germ cell and embryonal cancer | 3.16e-08 | 22 |
germ cell cancer | 3.16e-08 | 22 |