FFCP PHASE1:Hg19::chr4:89658773..89658782,-: Difference between revisions
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|id=chr4:89658773..89658782,-
|short_description=p38@FAM13A
|description=CAGE_peak_38_at_FAM13A_5end
|association_with_transcript=7bp_to_ENST00000511623_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10144 | |EntrezGene=10144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |HGNC=19367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000511623_5end | |||
|cluster_id=chr4:89658773..89658782,- | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_38_at_FAM13A_5end | |||
|id=chr4:89658773..89658782,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.63e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002368!2.62e-10!35;UBERON:0000007!1.73e-08!2;UBERON:0000341!2.15e-08!2;UBERON:0000949!5.27e-08!45;UBERON:0002107!1.99e-07!19;UBERON:0006925!1.99e-07!19;UBERON:0008836!1.99e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.21e-09;19!UBERON:0006925;2.21e-09;19!UBERON:0002046;2.63e-09;5!UBERON:0002368;3.91e-09;33!UBERON:0002423;2.31e-07;25!UBERON:0000949;8.23e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002368,4.95e-11,35;UBERON:0002107,2.17e-09,19;UBERON:0006925,2.17e-09,19;UBERON:0008836,2.17e-09,19;UBERON:0002046,2.74e-09,5;UBERON:0004117,2.74e-09,5;UBERON:0007689,2.74e-09,5;UBERON:0007123,2.74e-09,5;UBERON:0003091,2.74e-09,5;UBERON:0000949,9.36e-09,45;UBERON:0008835,3.04e-08,22;UBERON:0003894,3.04e-08,22;UBERON:0009854,6.29e-08,23;UBERON:0003929,2.03e-07,54;UBERON:0007499,2.28e-07,25;UBERON:0009497,2.28e-07,25;UBERON:0000015,2.28e-07,25;UBERON:0002423,2.28e-07,25;UBERON:0006235,2.28e-07,25;UBERON:0004161,2.28e-07,25;UBERON:0009856,4.02e-07,26;UBERON:0002530,7.53e-07,59 | |||
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|short_description=p38@FAM13A | |||
}} | }} |
Latest revision as of 08:06, 19 September 2015
Short description: | p38@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_FAM13A_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 7bp_to_ENST00000511623_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endocrine gland | 4.95e-11 | 35 |
liver | 2.17e-09 | 19 |
digestive gland | 2.17e-09 | 19 |
liver bud | 2.17e-09 | 19 |
thyroid gland | 2.74e-09 | 5 |
pharyngeal pouch | 2.74e-09 | 5 |
thyroid diverticulum | 2.74e-09 | 5 |
pharyngeal pouch 2 | 2.74e-09 | 5 |
thyroid primordium | 2.74e-09 | 5 |
endocrine system | 9.36e-09 | 45 |
hepatic diverticulum | 3.04e-08 | 22 |
liver primordium | 3.04e-08 | 22 |
digestive tract diverticulum | 6.29e-08 | 23 |
gut epithelium | 2.03e-07 | 54 |
epithelial sac | 2.28e-07 | 25 |
epithelium of foregut-midgut junction | 2.28e-07 | 25 |
anatomical boundary | 2.28e-07 | 25 |
hepatobiliary system | 2.28e-07 | 25 |
foregut-midgut junction | 2.28e-07 | 25 |
septum transversum | 2.28e-07 | 25 |
sac | 4.02e-07 | 26 |
gland | 7.53e-07 | 59 |