FFCP PHASE1:Hg19::chr19:50063996..50064043,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:50063996..50064043,-
|short_description=p2@NOSIP
|description=CAGE_peak_2_at_NOSIP_5end
|association_with_transcript=-47bp_to_BC011249_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51070 | |EntrezGene=51070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17946 | |HGNC=17946 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y314 | |UniProt=Q9Y314 | ||
|association_with_transcript=-47bp_to_BC011249_5end | |||
|cluster_id=chr19:50063996..50064043,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_NOSIP_5end | |||
|id=chr19:50063996..50064043,- | |||
|ontology_enrichment_celltype=CL:0000791!3.28e-22!18;CL:0000789!3.28e-22!18;CL:0002420!3.28e-22!18;CL:0002419!3.28e-22!18;CL:0000790!3.28e-22!18;CL:0000738!2.94e-18!140;CL:0000084!3.90e-18!25;CL:0000827!3.90e-18!25;CL:0000625!3.54e-16!11;CL:0002087!2.15e-15!119;CL:0002031!2.42e-14!124;CL:0000838!5.63e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000037!3.91e-12!172;CL:0000566!3.91e-12!172;CL:0002032!1.38e-10!165;CL:0000837!1.38e-10!165;CL:0000988!1.54e-10!182;CL:0000624!2.41e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.42e-40;18!CL:0000789;5.42e-40;18!CL:0002419;5.42e-40;18!CL:0000084;3.64e-34;25!CL:0000625;2.14e-28;11!CL:0000624;7.79e-16;6!CL:0000542;3.49e-10;53!CL:0000898;1.45e-08;3!CL:0000226;1.79e-08;3!CL:0000842;1.79e-08;3!CL:0000623;4.13e-08;3!CL:0000767;3.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.56e-40,18;CL:0000789,5.56e-40,18;CL:0002420,5.56e-40,18;CL:0002419,5.56e-40,18;CL:0000790,5.56e-40,18;CL:0000084,3.64e-34,25;CL:0000827,3.64e-34,25;CL:0000625,2.17e-28,11;CL:0000838,1.64e-20,52;CL:0000542,5.35e-20,53;CL:0000051,5.35e-20,53;CL:0000624,7.89e-16,6;CL:0000738,7.30e-14,136;CL:0002087,1.14e-12,115;CL:0000037,1.62e-09,168;CL:0002031,5.74e-09,120;CL:0000988,1.34e-08,177;CL:0000898,1.47e-08,3;CL:0000226,1.79e-08,3;CL:0000842,1.79e-08,3;CL:0000623,4.08e-08,3;CL:0000825,4.08e-08,3;CL:0002032,5.78e-08,161;CL:0000837,5.78e-08,161;CL:0000767,3.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.42e-40;18!CL:0000051;3.49e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.21e-17!115;UBERON:0000178!2.18e-12!15;UBERON:0000179!2.18e-12!15;UBERON:0000463!2.18e-12!15;UBERON:0002390!8.06e-11!102;UBERON:0003061!8.06e-11!102;UBERON:0002193!2.79e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.59e-22;15!UBERON:0000179;1.59e-22;15!UBERON:0000463;1.59e-22;15!UBERON:0002390;9.18e-15;32!UBERON:0002193;2.46e-10;42!UBERON:0004177;2.32e-07;5!UBERON:0005057;2.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.55e-22,15;UBERON:0000179,1.55e-22,15;UBERON:0000463,1.55e-22,15;UBERON:0004177,2.92e-08,7;UBERON:0005057,2.92e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,2.30297638858328,1.39334510984468,0,0,0,0,0,0,3.32397245119126,4.61252229181326,9.76548918221333,0.223915474239924,1.94336199611388,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0.918251677112708,0.962787081228281,0,0.329851300186716,0.398927315243264,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,1.17447437874188,0.382273228125229,0,5.60508562981536,0,48.3906034480029,58.9516144123747,62.9140586938498,7.18901930179916,32.9181489299926,42.1368547103913,46.7584148178987,22.5049122908051,13.5518717438425,16.1719743046043,9.20733136801053,9.86303161887699,10.2746884572304,36.1763390128087,36.7545523655178,49.556327660694,150.955721298977,128.152056654973,223.70602094265,52.9154630397634,80.4763036564035,76.6289203426265,68.0622971532463,98.1181476118218,88.5473497244729,83.6397799114569,90.4956465657414,81.2714980830557,78.7063577279779,78.8468249306576,55.8367037906312,17.5397866605517,12.3022490060413,44.8955652036677,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,12.4129378927214,16.6033232641828,18.9947693694028,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8084358923102,38.3971277457138,23.1598800433474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.984094600091,33.6440371142645,28.4823593587081,34.5436074413794,37.8453291239299,37.6114520491776,28.081634736382,53.9325119880104,0,0,0,0,0,8.53702120180969,10.3627077273735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,7.18338180380984,0,0,0,0,0,0,0,0.394573622547734,16.7638164642858,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,3.66618086960175,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,0,9.67925728389311,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.126621591911757,0,0,0.640358984218058,0.19980960958213,0,0,4.28987494654911,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.78602152549833,0.414239055347196,20.34280689429,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,2.19303106742873,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.923965261706223,2.3196288626764,0,0,0,0,0,1.31928620094515,0,0.385870790539723,1.5299169235277,0,0,0,0,0,0,0,3.38342104727473,5.9301256935691,0,0,0,0,0,6.42220996766357,0.573358332605805,0,0,0,8.46442944824641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,1.49263787330687,0.23806443146374,3.55239004098034,1.92431614317159,0,0,1.0105859447911,0,0.342233301085281,6.4657970894004,0.860666464712116,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,11.2713324410975,0 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| ||
|short_description=p2@NOSIP | |||
}} | }} |
Latest revision as of 08:10, 19 September 2015
Short description: | p2@NOSIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOSIP_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -47bp_to_BC011249_5end |
EntrezGene: | NOSIP |
HGNC: | 17946 |
UniProt: | Q9Y314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.56e-40 | 18 |
alpha-beta T cell | 5.56e-40 | 18 |
immature T cell | 5.56e-40 | 18 |
mature T cell | 5.56e-40 | 18 |
immature alpha-beta T cell | 5.56e-40 | 18 |
T cell | 3.64e-34 | 25 |
pro-T cell | 3.64e-34 | 25 |
CD8-positive, alpha-beta T cell | 2.17e-28 | 11 |
lymphoid lineage restricted progenitor cell | 1.64e-20 | 52 |
lymphocyte | 5.35e-20 | 53 |
common lymphoid progenitor | 5.35e-20 | 53 |
CD4-positive, alpha-beta T cell | 7.89e-16 | 6 |
leukocyte | 7.30e-14 | 136 |
nongranular leukocyte | 1.14e-12 | 115 |
hematopoietic stem cell | 1.62e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 5.74e-09 | 120 |
hematopoietic cell | 1.34e-08 | 177 |
naive T cell | 1.47e-08 | 3 |
single nucleate cell | 1.79e-08 | 3 |
mononuclear cell | 1.79e-08 | 3 |
natural killer cell | 4.08e-08 | 3 |
pro-NK cell | 4.08e-08 | 3 |
hematopoietic oligopotent progenitor cell | 5.78e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.78e-08 | 161 |
basophil | 3.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.55e-22 | 15 |
haemolymphatic fluid | 1.55e-22 | 15 |
organism substance | 1.55e-22 | 15 |
hemopoietic organ | 2.92e-08 | 7 |
immune organ | 2.92e-08 | 7 |