FFCP PHASE1:Hg19::chr11:65265673..65265687,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65265673..65265687,+
|short_description=p5@MALAT1
|description=CAGE_peak_5_at_MALAT1_5end
|association_with_transcript=440bp_to_ENST00000534336,NR_002819,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=378938 | |EntrezGene=378938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29665 | |HGNC=29665 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=440bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | |||
|cluster_id=chr11:65265673..65265687,+ | |||
|description=CAGE_peak_5_at_MALAT1_5end | |||
|id=chr11:65265673..65265687,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.91e-10!140;CL:0002031!3.96e-09!124;CL:0002087!2.75e-08!119;CL:0000838!5.58e-08!52;CL:0000542!1.86e-07!53;CL:0000051!1.86e-07!53;CL:0000236!5.16e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.39e-11;13!CL:0000791;8.30e-07;18!CL:0000789;8.30e-07;18!CL:0002419;8.30e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.01e-09,14;CL:0000838,3.13e-09,52;CL:0000542,7.18e-09,53;CL:0000051,7.18e-09,53;CL:0000791,1.33e-07,18;CL:0000789,1.33e-07,18;CL:0002420,1.33e-07,18;CL:0002419,1.33e-07,18;CL:0000790,1.33e-07,18;CL:0000738,8.21e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;8.30e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-16!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.66e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-14,114 | |||
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| ||
|short_description=p5@MALAT1 | |||
}} | }} |
Latest revision as of 08:59, 19 September 2015
Short description: | p5@MALAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MALAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 440bp_to_ENST00000534336, NR_002819, uc010roh.1_5end |
EntrezGene: | MALAT1 |
HGNC: | 29665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.01e-09 | 14 |
lymphoid lineage restricted progenitor cell | 3.13e-09 | 52 |
lymphocyte | 7.18e-09 | 53 |
common lymphoid progenitor | 7.18e-09 | 53 |
mature alpha-beta T cell | 1.33e-07 | 18 |
alpha-beta T cell | 1.33e-07 | 18 |
immature T cell | 1.33e-07 | 18 |
mature T cell | 1.33e-07 | 18 |
immature alpha-beta T cell | 1.33e-07 | 18 |
leukocyte | 8.21e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-14 | 114 |