FFCP PHASE1:Hg19::chr14:23598960..23598982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23428 | |EntrezGene=23428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11066 | |HGNC=11066 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=369bp_to_ENST00000397310,uc001wiw.2_5end | |association_with_transcript=369bp_to_ENST00000397310,uc001wiw.2_5end | ||
|cluster_id=chr14:23598960..23598982,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_12_at_SLC7A8_5end | |description=CAGE_peak_12_at_SLC7A8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;1.53e-09;3 | |ontology_enrichment_celltype_v019=CL:0002623;1.53e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.16e-26;1!UBERON:0005754;3.15e-26;1!UBERON:0007297;7.77e-14;2 | |ontology_enrichment_development_v019=UBERON:0003124;2.16e-26;1!UBERON:0005754;3.15e-26;1!UBERON:0007297;7.77e-14;2 | ||
|ontology_enrichment_disease=DOID:5093!1.65e-10!4;DOID:1612!1.65e-10!4 | |ontology_enrichment_disease=DOID:5093!1.65e-10!4;DOID:1612!1.65e-10!4 | ||
|ontology_enrichment_disease_v019=DOID:3151;7.62e-26;1!DOID:3149;7.62e-26;1!DOID:5093;1.62e-25;4!DOID:1612;1.62e-25;4!DOID:3451;1.21e-13;2!DOID:4159;1.21e-13;2!DOID:0060122;1.21e-13;2 | |ontology_enrichment_disease_v019=DOID:3151;7.62e-26;1!DOID:3149;7.62e-26;1!DOID:5093;1.62e-25;4!DOID:1612;1.62e-25;4!DOID:3451;1.21e-13;2!DOID:4159;1.21e-13;2!DOID:0060122;1.21e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.11e-25,4;DOID:1612,1.11e-25,4;DOID:3151,1.26e-25,1;DOID:3149,1.26e-25,1;DOID:3451,1.55e-13,2;DOID:4159,1.55e-13,2;DOID:0060122,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-08!115;UBERON:0000310!3.72e-08!10;UBERON:0001443!2.48e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!3.15e-08!115;UBERON:0000310!3.72e-08!10;UBERON:0001443!2.48e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;3.15e-26;1!UBERON:0006868;3.15e-26;1!UBERON:0000310;7.67e-11;10!UBERON:0001443;6.06e-10;11!UBERON:0006947;1.14e-09;3!UBERON:0004054;1.14e-09;3!UBERON:0001987;1.31e-07;4!UBERON:0005904;1.44e-07;4!UBERON:0000014;1.80e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000998;3.15e-26;1!UBERON:0006868;3.15e-26;1!UBERON:0000310;7.67e-11;10!UBERON:0001443;6.06e-10;11!UBERON:0006947;1.14e-09;3!UBERON:0004054;1.14e-09;3!UBERON:0001987;1.31e-07;4!UBERON:0005904;1.44e-07;4!UBERON:0000014;1.80e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.58e-26,1;UBERON:0006868,3.58e-26,1;UBERON:0000310,6.61e-11,10;UBERON:0001443,5.29e-10,11;UBERON:0006947,1.19e-09,3;UBERON:0004054,1.19e-09,3;UBERON:0001987,1.31e-07,4;UBERON:0004340,1.31e-07,4;UBERON:0005904,1.49e-07,4;UBERON:0000014,2.04e-07,4 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0.545492241181669,0,0.243947412259191,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,1.5625665665114,0.262379999988587,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.975966209950223,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0,1.0063040627978,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,14.1036768558596,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,1.38251932362818,0,0,0,2.11693525095465,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p12@SLC7A8 | |short_description=p12@SLC7A8 | ||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p12@SLC7A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC7A8_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 369bp_to_ENST00000397310, uc001wiw.2_5end |
EntrezGene: | SLC7A8 |
HGNC: | 11066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 3.58e-26 | 1 |
seminal fluid secreting gland | 3.58e-26 | 1 |
breast | 6.61e-11 | 10 |
chest | 5.29e-10 | 11 |
male genital duct | 1.19e-09 | 3 |
internal male genitalia | 1.19e-09 | 3 |
placenta | 1.31e-07 | 4 |
allantois | 1.31e-07 | 4 |
duct of male reproductive system | 1.49e-07 | 4 |
zone of skin | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.11e-25 | 4 |
breast cancer | 1.11e-25 | 4 |
skin squamous cell carcinoma | 1.26e-25 | 1 |
keratoacanthoma | 1.26e-25 | 1 |
skin carcinoma | 1.55e-13 | 2 |
skin cancer | 1.55e-13 | 2 |
integumentary system cancer | 1.55e-13 | 2 |