FFCP PHASE1:Hg19::chr12:56361058..56361072,+: Difference between revisions
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|id=chr12:56361058..56361072,+
|short_description=p14@CDK2
|description=CAGE_peak_14_at_CDK2_5end
|association_with_transcript=0bp_to_ENST00000556276_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1017 | |EntrezGene=1017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1771 | |HGNC=1771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000556276_5end | |||
|cluster_id=chr12:56361058..56361072,+ | |||
|coexpression_cluster_id=C897 | |||
|description=CAGE_peak_14_at_CDK2_5end | |||
|id=chr12:56361058..56361072,+ | |||
|ontology_enrichment_celltype=CL:0000148!5.77e-19!10;CL:0000541!5.77e-19!10;CL:0000710!8.67e-16!20;CL:0000147!2.30e-13!14;CL:0000075!2.34e-11!27;CL:0002077!4.66e-09!33;CL:0002567!3.41e-08!3;CL:0002566!8.81e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;8.32e-82;10!CL:0000147;1.10e-58;14!CL:0002567;1.36e-44;3!CL:0000710;2.56e-41;20!CL:0002566;7.05e-34;1!CL:0000075;8.55e-31;27!CL:0002077;7.04e-25;34!CL:0000149;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.32e-82,10;CL:0000541,8.32e-82,10;CL:0000147,1.10e-58,14;CL:0002567,1.91e-44,3;CL:0000710,2.56e-41,20;CL:0002566,5.05e-34,1;CL:0000075,8.55e-31,27;CL:0002077,1.36e-24,34;CL:0000333,1.42e-19,41;CL:0000133,5.87e-14,59;CL:0000221,1.37e-11,72;CL:0000149,1.57e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;9.63e-09;59!CL:0000221;9.78e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!6.61e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.48e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.48e-18,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p14@CDK2 | |||
}} | }} |
Latest revision as of 09:22, 19 September 2015
Short description: | p14@CDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CDK2_5end |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | 0bp_to_ENST00000556276_5end |
EntrezGene: | CDK2 |
HGNC: | 1771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.32e-82 | 10 |
melanoblast | 8.32e-82 | 10 |
pigment cell | 1.10e-58 | 14 |
light melanocyte | 1.91e-44 | 3 |
neurecto-epithelial cell | 2.56e-41 | 20 |
dark melanocyte | 5.05e-34 | 1 |
columnar/cuboidal epithelial cell | 8.55e-31 | 27 |
ecto-epithelial cell | 1.36e-24 | 34 |
migratory neural crest cell | 1.42e-19 | 41 |
neurectodermal cell | 5.87e-14 | 59 |
ectodermal cell | 1.37e-11 | 72 |
visual pigment cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.48e-18 | 2 |