FFCP PHASE1:Hg19::chr22:24236622..24236633,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:24236622..24236633,+
|short_description=p2@MIF
|description=CAGE_peak_2_at_MIF_5end
|association_with_transcript=-3bp_to_ENST00000465752_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4282 | |EntrezGene=4282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7097 | |HGNC=7097 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000465752_5end | |||
|cluster_id=chr22:24236622..24236633,+ | |||
|description=CAGE_peak_2_at_MIF_5end | |||
|id=chr22:24236622..24236633,+ | |||
|ontology_enrichment_celltype=CL:0000393!7.46e-11!60;CL:0000211!7.46e-11!60;CL:0000183!1.11e-10!59;CL:0000359!8.65e-10!32;CL:0000187!1.46e-09!54;CL:0000680!1.50e-09!57;CL:0000056!1.50e-09!57;CL:0000355!1.50e-09!57;CL:0000192!1.15e-08!42;CL:0000514!1.15e-08!42;CL:0000055!4.13e-08!180;CL:0000222!2.71e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.97e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.03e-10,61;CL:0000211,1.03e-10,61;CL:0000359,8.65e-10,32;CL:0000187,1.98e-09,55;CL:0000680,2.00e-09,58;CL:0000056,2.00e-09,58;CL:0000355,2.00e-09,58;CL:0000192,1.65e-08,43;CL:0000514,1.65e-08,43;CL:0000222,1.92e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.21e-09!70;UBERON:0001637!7.15e-09!42;UBERON:0003509!7.15e-09!42;UBERON:0004572!7.15e-09!42;UBERON:0000486!1.42e-08!82;UBERON:0001134!1.98e-08!61;UBERON:0002036!1.98e-08!61;UBERON:0003082!1.98e-08!61;UBERON:0000914!6.34e-08!83;UBERON:0002329!6.34e-08!83;UBERON:0003077!6.34e-08!83;UBERON:0003059!6.34e-08!83;UBERON:0007282!6.34e-08!83;UBERON:0009618!6.34e-08!83;UBERON:0007285!6.34e-08!83;UBERON:0002385!1.97e-07!63;UBERON:0001015!1.97e-07!63;UBERON:0000383!1.97e-07!63;UBERON:0004872!2.59e-07!84;UBERON:0003914!6.17e-07!118;UBERON:0001981!9.03e-07!60;UBERON:0007500!9.03e-07!60;UBERON:0004537!9.03e-07!60;UBERON:0006965!9.03e-07!60;UBERON:0004573!9.39e-07!33;UBERON:0004571!9.39e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.88e-11,78;UBERON:0007524,1.56e-09,73;UBERON:0003077,1.97e-09,72;UBERON:0007285,1.97e-09,72;UBERON:0002329,4.02e-09,71;UBERON:0003059,4.02e-09,71;UBERON:0007282,4.02e-09,71;UBERON:0004290,4.02e-09,71;UBERON:0009618,4.02e-09,71;UBERON:0001637,7.15e-09,42;UBERON:0003509,7.15e-09,42;UBERON:0004572,7.15e-09,42;UBERON:0000486,1.69e-08,83;UBERON:0001134,2.50e-08,62;UBERON:0002036,2.50e-08,62;UBERON:0003082,2.50e-08,62;UBERON:0002385,2.39e-07,64;UBERON:0001015,2.39e-07,64;UBERON:0000383,2.39e-07,64;UBERON:0004872,4.73e-07,83;UBERON:0003914,5.65e-07,117;UBERON:0000483,8.87e-07,306;UBERON:0004573,9.39e-07,33;UBERON:0004571,9.39e-07,33 | |||
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| ||
|short_description=p2@MIF | |||
}} | }} |
Latest revision as of 09:46, 19 September 2015
Short description: | p2@MIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIF_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000465752_5end |
EntrezGene: | MIF |
HGNC: | 7097 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.03e-10 | 61 |
electrically active cell | 1.03e-10 | 61 |
vascular associated smooth muscle cell | 8.65e-10 | 32 |
muscle cell | 1.98e-09 | 55 |
muscle precursor cell | 2.00e-09 | 58 |
myoblast | 2.00e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.00e-09 | 58 |
smooth muscle cell | 1.65e-08 | 43 |
smooth muscle myoblast | 1.65e-08 | 43 |
mesodermal cell | 1.92e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.88e-11 | 78 |
dense mesenchyme tissue | 1.56e-09 | 73 |
paraxial mesoderm | 1.97e-09 | 72 |
presumptive paraxial mesoderm | 1.97e-09 | 72 |
somite | 4.02e-09 | 71 |
presomitic mesoderm | 4.02e-09 | 71 |
presumptive segmental plate | 4.02e-09 | 71 |
dermomyotome | 4.02e-09 | 71 |
trunk paraxial mesoderm | 4.02e-09 | 71 |
artery | 7.15e-09 | 42 |
arterial blood vessel | 7.15e-09 | 42 |
arterial system | 7.15e-09 | 42 |
multilaminar epithelium | 1.69e-08 | 83 |
skeletal muscle tissue | 2.50e-08 | 62 |
striated muscle tissue | 2.50e-08 | 62 |
myotome | 2.50e-08 | 62 |
muscle tissue | 2.39e-07 | 64 |
musculature | 2.39e-07 | 64 |
musculature of body | 2.39e-07 | 64 |
splanchnic layer of lateral plate mesoderm | 4.73e-07 | 83 |
epithelial tube | 5.65e-07 | 117 |
epithelium | 8.87e-07 | 306 |
systemic artery | 9.39e-07 | 33 |
systemic arterial system | 9.39e-07 | 33 |