FFCP PHASE1:Hg19::chr11:65638737..65638752,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3219 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-64bp_to_ENST00000527969_5end | |||
|cluster_id=chr11:65638737..65638752,- | |||
|description=CAGE_peak_11_at_EFEMP2_5end | |||
|id=chr11:65638737..65638752,- | |||
|ontology_enrichment_celltype=CL:0000055!2.04e-21!180;CL:0000057!1.58e-16!75;CL:0000136!1.48e-09!15;CL:0002334!5.18e-09!12;CL:0000153!7.87e-08!9;CL:0000447!7.87e-08!9;CL:0000048!1.66e-07!430;CL:0000183!4.25e-07!59;CL:0000144!4.60e-07!625;CL:0000723!5.50e-07!436;CL:0000667!6.35e-07!6;CL:0000058!6.35e-07!6;CL:0000138!6.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;7.28e-19;9!CL:0000447;7.28e-19;9!CL:0002334;2.04e-18;12!CL:0000136;1.65e-17;13!CL:0000138;1.41e-14;6!CL:0002615;2.07e-12;3!CL:0002579;7.09e-12;3!CL:0000327;6.39e-11;15!CL:0000499;5.16e-09;28!CL:1000306;7.69e-09;4!CL:0002547;7.69e-09;4!CL:0002617;2.46e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.72e-19,9;CL:0000447,4.72e-19,9;CL:0002334,1.19e-18,12;CL:0000136,6.52e-15,15;CL:0000058,9.70e-15,6;CL:0000138,9.70e-15,6;CL:0002615,2.20e-12,3;CL:0002579,7.82e-12,3;CL:0000327,4.98e-11,15;CL:0000057,1.04e-09,76;CL:0002320,1.19e-09,361;CL:0000134,2.54e-09,354;CL:0000048,2.97e-09,427;CL:0000499,4.33e-09,28;CL:0000723,5.59e-09,433;CL:1000306,8.37e-09,4;CL:0002547,8.37e-09,4;CL:0000034,1.26e-08,441;CL:0002617,2.81e-08,2;CL:0000219,1.14e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.93e-09!14;UBERON:0004457!2.17e-08!12;UBERON:0000042!2.17e-08!12;UBERON:0003688!4.49e-08!6;UBERON:0002358!4.49e-08!6;UBERON:0003684!4.49e-08!6;UBERON:0001178!4.49e-08!6;UBERON:0003102!9.47e-08!95;UBERON:0000914!4.21e-07!83;UBERON:0002329!4.21e-07!83;UBERON:0003077!4.21e-07!83;UBERON:0003059!4.21e-07!83;UBERON:0007282!4.21e-07!83;UBERON:0009618!4.21e-07!83;UBERON:0007285!4.21e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.16e-26;9!UBERON:0000042;4.16e-26;9!UBERON:0003688;1.54e-22;6!UBERON:0002358;1.54e-22;6!UBERON:0003684;1.54e-22;6!UBERON:0001178;1.54e-22;6!UBERON:0005406;7.27e-09;2!UBERON:0004797;7.69e-09;4!UBERON:0000415;7.69e-09;4!UBERON:0007240;7.69e-09;4!UBERON:0005742;7.69e-09;4!UBERON:0005734;7.69e-09;4!UBERON:0004664;7.69e-09;4!UBERON:0004663;7.69e-09;4!UBERON:0002072;3.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.81e-22,6;UBERON:0002358,1.81e-22,6;UBERON:0003684,1.81e-22,6;UBERON:0001178,1.81e-22,6;UBERON:0004457,3.27e-19,12;UBERON:0000042,3.27e-19,12;UBERON:0004923,1.20e-10,66;UBERON:0002384,3.98e-09,371;UBERON:0005406,6.50e-09,2;UBERON:0000415,8.37e-09,4;UBERON:0007240,8.37e-09,4;UBERON:0005742,8.37e-09,4;UBERON:0005734,8.37e-09,4;UBERON:0004664,8.37e-09,4;UBERON:0004663,8.37e-09,4;UBERON:0002072,3.26e-07,5;UBERON:0004458,4.31e-07,49 | |||
|phase1_expression=3.08853244759946,1.49870366723688,2.11431606143957,4.00293193412522,5.81049422755474,3.48935409640147,7.59899634504932,1.26343974685366,0.783556884599516,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,2.00535164254356,1.73815822752988,1.5905718941022,1.94653948121054,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,1.77282716330412,0.264818361626438,8.03142538096678,1.06400514659507,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0,0.454072282934794,0,0,1.24864030732128,0,0.448346041655403,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,3.56400857184616,0.494533858557114,0,1.43723628363248,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.751190294532984,0.113432183160021,0,0.640672166455702,0.635795703478686,0.300091096084402,0.618315175430633,0,1.30281799432113,0.337552664482532,0.487185025805993,0,0.552299391853796,0.646584227275248,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,3.12899064659632,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.432359860250884,0.50496973370552,0,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0,0.258543431515556,3.57656445851882,0,0.797814349754612,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.535286966391485,0,0.234282829985426,1.20378439891088,15.9185252839189,1.03473071292505,0,0,0.60818530127658,1.17480694477644,0.686286847621712,0,0,0,0,1.66435439510497,0.604780586659361,3.47350930946288,0,1.96462066103151,3.20347873139252,1.53512174720011,3.05622450172854,4.45254199334973,0,1.9531789784444,0.821271560138091,0.519254429183621,1.27831416305955,0,0.601519410909855,0,0.803701137152247,0.728364672026868,6.29397191805236,0,0,0,1.46139224653261,0,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.984043937099117,0.650756789328606,0,0.0915694648183434,0,0,0,12.8547143875328,1.16004861950546,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.929691098594572,3.1481234683064,0,0,0.532306030317022,0,0.74129687641568,0.143124886741991,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0,0.95460974377781,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,0.545999645631943,2.40389234321312,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,4.01104507065562,2.96365403663912,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,0,0,0,5.42999601753713,0,1.63293680054705,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.701139929541673,0.554805861502613,0,0,0.889811221596536,0.915360273587694,0.151230923763239,0,0,0,1.79921244865442,0,0.414706207840855,0.53168342911599,1.5652351854352,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0.464033759878494,1.59238355479446,0,0.686791410365586,0.673498977531838,0,0,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0.318004350653419,0,0,2.1160556621441,0.918736432059601,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.1543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| |||
|short_description=p11@EFEMP2 | |||
}} |
Latest revision as of 11:44, 19 September 2015
Short description: | p11@EFEMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_EFEMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000527969_5end |
EntrezGene: | EFEMP2 |
HGNC: | 3219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.72e-19 | 9 |
carbohydrate secreting cell | 4.72e-19 | 9 |
preadipocyte | 1.19e-18 | 12 |
fat cell | 6.52e-15 | 15 |
chondroblast | 9.70e-15 | 6 |
chondrocyte | 9.70e-15 | 6 |
adipocyte of omentum tissue | 2.20e-12 | 3 |
omentum preadipocyte | 7.82e-12 | 3 |
extracellular matrix secreting cell | 4.98e-11 | 15 |
fibroblast | 1.04e-09 | 76 |
connective tissue cell | 1.19e-09 | 361 |
mesenchymal cell | 2.54e-09 | 354 |
multi fate stem cell | 2.97e-09 | 427 |
stromal cell | 4.33e-09 | 28 |
somatic stem cell | 5.59e-09 | 433 |
fibroblast of tunica adventitia of artery | 8.37e-09 | 4 |
fibroblast of the aortic adventitia | 8.37e-09 | 4 |
stem cell | 1.26e-08 | 441 |
adipocyte of breast | 2.81e-08 | 2 |
motile cell | 1.14e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.81e-22 | 6 |
peritoneum | 1.81e-22 | 6 |
abdominal cavity | 1.81e-22 | 6 |
visceral peritoneum | 1.81e-22 | 6 |
cavity lining | 3.27e-19 | 12 |
serous membrane | 3.27e-19 | 12 |
organ component layer | 1.20e-10 | 66 |
connective tissue | 3.98e-09 | 371 |
perirenal fat | 6.50e-09 | 2 |
artery wall | 8.37e-09 | 4 |
tunica adventitia of artery | 8.37e-09 | 4 |
adventitia | 8.37e-09 | 4 |
tunica adventitia of blood vessel | 8.37e-09 | 4 |
aorta tunica adventitia | 8.37e-09 | 4 |
aorta wall | 8.37e-09 | 4 |
hypodermis | 3.26e-07 | 5 |
body cavity or lining | 4.31e-07 | 49 |