FFCP PHASE1:Hg19::chr1:84874026..84874036,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:84874026..84874036,+
|short_description=p3@DNASE2B
|description=CAGE_peak_3_at_DNASE2B_5end
|association_with_transcript=0bp_to_NM_058248,uc001dju.1_5end
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58511 | |EntrezGene=58511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28875 | |HGNC=28875 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WZ79 | |UniProt=Q8WZ79 | ||
|association_with_transcript=0bp_to_NM_058248,uc001dju.1_5end | |||
|cluster_id=chr1:84874026..84874036,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_3_at_DNASE2B_5end | |||
|id=chr1:84874026..84874036,+ | |||
|ontology_enrichment_celltype=CL:0000235!4.58e-24!10;CL:0002194!5.16e-15!63;CL:0000576!5.16e-15!63;CL:0000040!5.16e-15!63;CL:0000559!5.16e-15!63;CL:0002009!1.75e-14!65;CL:0000839!2.72e-13!70;CL:0000557!4.50e-13!71;CL:0000766!4.59e-12!76;CL:0002567!3.65e-10!3;CL:0002619!1.22e-09!3;CL:0002566!3.83e-08!1;CL:0000763!1.88e-07!112;CL:0000049!1.88e-07!112;CL:0002087!7.01e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.60e-48;6!CL:0002567;2.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.60e-48,6;CL:0002567,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.08e-19;1!UBERON:0006298;1.30e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.17e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001829!3.22e-15!2;UBERON:0002371!2.39e-11!80;UBERON:0001044!2.97e-11!6;UBERON:0003293!2.97e-11!6;UBERON:0003294!2.97e-11!6;UBERON:0010047!2.97e-11!6;UBERON:0000167!2.97e-11!6;UBERON:0001474!2.13e-10!86;UBERON:0004765!1.63e-08!101;UBERON:0001434!1.63e-08!101;UBERON:0001831!1.77e-08!1;UBERON:0001567!1.77e-08!1;UBERON:0008801!1.77e-08!1;UBERON:0001736!1.91e-08!1;UBERON:0006298!1.91e-08!1;UBERON:0002390!2.08e-08!102;UBERON:0003061!2.08e-08!102;UBERON:0002171!3.58e-08!1;UBERON:0006518!3.58e-08!1;UBERON:0008949!3.58e-08!1;UBERON:0000101!3.58e-08!1;UBERON:0002167!3.58e-08!1;UBERON:0002193!1.88e-07!112;UBERON:0002405!3.37e-07!115;UBERON:0003408!6.36e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.89e-37;2!UBERON:0001044;4.10e-28;6!UBERON:0003293;4.10e-28;6!UBERON:0003294;4.10e-28;6!UBERON:0010047;4.10e-28;6!UBERON:0003408;4.10e-28;6!UBERON:0000167;4.10e-28;6!UBERON:0001831;1.08e-19;1!UBERON:0001567;1.08e-19;1!UBERON:0001736;1.30e-19;1!UBERON:0001041;1.86e-12;14!UBERON:0004089;1.57e-10;2!UBERON:0000161;2.44e-09;19!UBERON:0000166;2.44e-09;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.89e-37,2;UBERON:0001044,4.10e-28,6;UBERON:0003293,4.10e-28,6;UBERON:0003294,4.10e-28,6;UBERON:0010047,4.10e-28,6;UBERON:0000167,4.10e-28,6;UBERON:0001831,1.08e-19,1;UBERON:0001567,1.08e-19,1;UBERON:0008801,1.08e-19,1;UBERON:0001736,1.30e-19,1;UBERON:0006298,1.30e-19,1;UBERON:0003408,3.59e-17,10;UBERON:0004089,1.57e-10,2;UBERON:0000166,3.84e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0.825472625798197,0.763976851116555,2.34434894420094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,2.12308764558307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,12.061670870858,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6625047351153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,11.009502801709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0.825472625798197,0.763976851116555,2.34434894420094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,2.12308764558307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,12.061670870858,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6625047351153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,11.009502801709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@DNASE2B | |||
}} | }} |
Latest revision as of 12:02, 19 September 2015
Short description: | p3@DNASE2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNASE2B_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_NM_058248, uc001dju.1_5end |
EntrezGene: | DNASE2B |
HGNC: | 28875 |
UniProt: | Q8WZ79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.60e-48 | 6 |
light melanocyte | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.89e-37 | 2 |
saliva-secreting gland | 4.10e-28 | 6 |
gland of oral region | 4.10e-28 | 6 |
gland of foregut | 4.10e-28 | 6 |
oral gland | 4.10e-28 | 6 |
oral cavity | 4.10e-28 | 6 |
parotid gland | 1.08e-19 | 1 |
cheek | 1.08e-19 | 1 |
parotid gland primordium | 1.08e-19 | 1 |
submandibular gland | 1.30e-19 | 1 |
submandibular gland primordium | 1.30e-19 | 1 |
gland of gut | 3.59e-17 | 10 |
midface | 1.57e-10 | 2 |
oral opening | 3.84e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.27e-10 | 2 |