FFCP PHASE1:Hg19::chr3:69986115..69986119,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:69986115..69986119,+
|short_description=p12@MITF
|description=CAGE_peak_12_at_MITF_5end
|association_with_transcript=135bp_to_ENST00000461014_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=135bp_to_ENST00000461014_5end | |||
|cluster_id=chr3:69986115..69986119,+ | |||
|coexpression_cluster_id=C1318 | |||
|description=CAGE_peak_12_at_MITF_5end | |||
|id=chr3:69986115..69986119,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.73e-11!5;CL:0000457!1.73e-11!5;CL:0002191!1.73e-11!5;CL:0000097!1.73e-11!5;CL:0000831!1.73e-11!5;CL:0002028!1.73e-11!5;CL:0000148!3.46e-09!10;CL:0000541!3.46e-09!10;CL:0000710!6.50e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.03e-88;10!CL:0000147;3.50e-63;14!CL:0000710;2.31e-44;20!CL:0002567;5.99e-34;3!CL:0000075;5.86e-33;27!CL:0002566;2.78e-26;1!CL:0002077;1.47e-24;34!CL:0000149;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.61e-88,10;CL:0000541,2.61e-88,10;CL:0000147,3.14e-63,14;CL:0000710,2.14e-44,20;CL:0002567,6.51e-34,3;CL:0000075,5.54e-33,27;CL:0002566,2.78e-26,1;CL:0002077,2.94e-26,34;CL:0000333,8.12e-21,41;CL:0000133,9.89e-15,59;CL:0000221,3.63e-12,72;CL:0000149,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.01e-09;3!CL:0000133;3.21e-08;59!CL:0000221;6.00e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@MITF | |||
}} | }} |
Latest revision as of 12:25, 19 September 2015
Short description: | p12@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MITF_5end |
Coexpression cluster: | C1318_retina_Melanocyte_globus_caudate_eye_melanoma_nucleus |
Association with transcript: | 135bp_to_ENST00000461014_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.61e-88 | 10 |
melanoblast | 2.61e-88 | 10 |
pigment cell | 3.14e-63 | 14 |
neurecto-epithelial cell | 2.14e-44 | 20 |
light melanocyte | 6.51e-34 | 3 |
columnar/cuboidal epithelial cell | 5.54e-33 | 27 |
dark melanocyte | 2.78e-26 | 1 |
ecto-epithelial cell | 2.94e-26 | 34 |
migratory neural crest cell | 8.12e-21 | 41 |
neurectodermal cell | 9.89e-15 | 59 |
ectodermal cell | 3.63e-12 | 72 |
visual pigment cell | 1.92e-07 | 4 |