FFCP PHASE1:Hg19::chr6:64345755..64345766,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23469 | |EntrezGene=23469 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8921 | |HGNC=8921 | ||
|TSSclassifier=strong | |||
|UniProt=Q92576,B3KP41 | |UniProt=Q92576,B3KP41 | ||
|association_with_transcript=14bp_to_ENST00000262043,ENST00000494284_5end | |association_with_transcript=14bp_to_ENST00000262043,ENST00000494284_5end | ||
|cluster_id=chr6:64345755..64345766,+ | |||
|description=CAGE_peak_4_at_PHF3_5end | |description=CAGE_peak_4_at_PHF3_5end | ||
|id=chr6:64345755..64345766,+ | |id=chr6:64345755..64345766,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.31e-13!172;CL:0000566!1.31e-13!172;CL:0000988!5.07e-12!182;CL:0002032!1.44e-11!165;CL:0000837!1.44e-11!165;CL:0000738!8.53e-11!140;CL:0000542!5.02e-10!53;CL:0000051!5.02e-10!53;CL:0000838!8.09e-10!52;CL:0002087!7.25e-09!119;CL:0002031!1.73e-08!124 | |ontology_enrichment_celltype=CL:0000037!1.31e-13!172;CL:0000566!1.31e-13!172;CL:0000988!5.07e-12!182;CL:0002032!1.44e-11!165;CL:0000837!1.44e-11!165;CL:0000738!8.53e-11!140;CL:0000542!5.02e-10!53;CL:0000051!5.02e-10!53;CL:0000838!8.09e-10!52;CL:0002087!7.25e-09!119;CL:0002031!1.73e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.09e-13;6!CL:0000791;1.19e-13;18!CL:0000789;1.19e-13;18!CL:0002419;1.19e-13;18!CL:0000542;2.61e-13;53!CL:0000084;9.45e-11;25!CL:0000236;4.96e-10;13!CL:0000784;1.17e-07;3!CL:0000623;1.66e-07;3!CL:0000898;4.11e-07;3 | |ontology_enrichment_celltype_v019=CL:0000624;1.09e-13;6!CL:0000791;1.19e-13;18!CL:0000789;1.19e-13;18!CL:0002419;1.19e-13;18!CL:0000542;2.61e-13;53!CL:0000084;9.45e-11;25!CL:0000236;4.96e-10;13!CL:0000784;1.17e-07;3!CL:0000623;1.66e-07;3!CL:0000898;4.11e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.81e-19,52;CL:0000542,1.50e-18,53;CL:0000051,1.50e-18,53;CL:0000738,7.42e-15,136;CL:0000037,3.78e-14,168;CL:0000624,3.95e-14,6;CL:0000791,4.56e-14,18;CL:0000789,4.56e-14,18;CL:0002420,4.56e-14,18;CL:0002419,4.56e-14,18;CL:0000790,4.56e-14,18;CL:0000988,9.49e-14,177;CL:0002087,1.12e-12,115;CL:0000084,6.04e-11,25;CL:0000827,6.04e-11,25;CL:0002031,7.96e-11,120;CL:0002032,8.79e-11,161;CL:0000837,8.79e-11,161;CL:0000236,2.52e-09,14;CL:0000784,6.18e-08,3;CL:0000623,8.10e-08,3;CL:0000825,8.10e-08,3;CL:0000898,1.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-13;18!CL:0000051;2.61e-13;53 | |ontology_enrichment_development_v019=CL:0000790;1.19e-13;18!CL:0000051;2.61e-13;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0.376627918784408,0.229240217243854,0.57470412614962,0.236132343941038,0.393364276848904,1.15148819429164,0.77408061658038,0,0.30120591877825,0.369754010166788,1.00707360754392,0.142169232487422,0.293600439334847,1.66198622559563,0.802177789880567,1.30206522429511,0.223915474239924,0,0.515151135268373,0.726991193897824,0.755751887377619,0.242584061187816,0.464858073811369,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.818718450173537,1.12361742222542,0,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,0,0,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0.736555271975129,0.632924774881769,0.633765858935825,0.425208599930087,1.25795187305026,0.22465726229299,0.300353785683013,0.64290234678832,1.71007646244749,0.79566670879636,1.0959849225878,0,0.546138611262131,4.44754626931777,2.56038133539904,1.60158394814405,1.14950487990897,1.32208974556972,0,2.84606484554724,3.52342313622563,2.6759125968766,2.64342657158052,0.560508562981536,0.790152254325231,3.34406609193516,4.71612915298998,3.28962398399215,0.334372990781356,1.62961133316795,1.4203434172042,1.94826728407911,0.222820913770347,1.76763544484902,0.221533894583621,1.08321545506006,0.25618263945135,0.390178042679635,0.493313713811028,0,0,3.55887751588945,2.40786745280742,1.04535523804977,0.339928028092699,2.29932296161153,2.40539211837841,1.01207876807801,0,0,1.90090408889675,0.752875595388864,0.255973222308837,0,0.236777252044017,3.28451198768419,5.04016858061831,3.4767225451856,4.34473211648397,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0,0.196468613246569,0,0,0.324547393654683,0,0.26591592103773,1.66943437013739,2.85997455390064,4.08603251462521,0,0,0.347140501607594,0,0,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0.446498641420399,0.673588117878509,0.450445921933289,1.53316637465883,0.949265659568129,0.183201743930407,1.31780417436063,0,0,1.49091585508596,0.12663051166458,0.662045904066094,0,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0,0.817309515567294,0.151357427644931,0,0,0,0,0.448346041655403,0.469737994575059,0.161872944368132,0,0.61246251376468,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0,0.460249493211497,0.161646056818812,0,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,1.06023814657188,0.348581828608555,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,1.7658523976586,0,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0.352193736052904,0.621984346622316,0.720599767084807,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0,0.285826432630578,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.537182889719687,0.112085143993527,1.97030760201927,2.37190332345469,2.56686072559497,0,0,0,0.502548796003046,0,0.749007023947182,0,1.65766205374414,0,0,0,0.623912584592421,0.178428988797162,0,0.117141414992713,0,0,0,1.32845119707087,0,0.173767228936166,0,0,1.03384013061444,0.431428401637234,2.02782359826544,0,0,0,0,0.153461973288062,0.280660094433074,0.384417447767103,1.02341449813341,0.321707842287215,1.48418066444991,0.462629081407967,0.177561725313127,0.328508624055237,0,0.116210378459959,0.725156697549733,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0.308061348417659,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0.223874754722178,0.657779629937804,1.0457418040996,0.512900250232778,0,0,0.309123034943167,0.732555718546747,0.742585499285292,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0.413509717453592,0.537101224341368,0,0.511359764496605,0.267096106940212,0,0.384380134730212,0.893288987462089,0.30347334256665,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0.282431402330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| ||
|short_description=p4@PHF3 | |short_description=p4@PHF3 | ||
}} | }} |
Latest revision as of 12:49, 19 September 2015
Short description: | p4@PHF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000262043, ENST00000494284_5end |
EntrezGene: | PHF3 |
HGNC: | 8921 |
UniProt: | Q92576B3KP41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.81e-19 | 52 |
lymphocyte | 1.50e-18 | 53 |
common lymphoid progenitor | 1.50e-18 | 53 |
leukocyte | 7.42e-15 | 136 |
hematopoietic stem cell | 3.78e-14 | 168 |
CD4-positive, alpha-beta T cell | 3.95e-14 | 6 |
mature alpha-beta T cell | 4.56e-14 | 18 |
alpha-beta T cell | 4.56e-14 | 18 |
immature T cell | 4.56e-14 | 18 |
mature T cell | 4.56e-14 | 18 |
immature alpha-beta T cell | 4.56e-14 | 18 |
hematopoietic cell | 9.49e-14 | 177 |
nongranular leukocyte | 1.12e-12 | 115 |
T cell | 6.04e-11 | 25 |
pro-T cell | 6.04e-11 | 25 |
hematopoietic lineage restricted progenitor cell | 7.96e-11 | 120 |
hematopoietic oligopotent progenitor cell | 8.79e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.79e-11 | 161 |
B cell | 2.52e-09 | 14 |
plasmacytoid dendritic cell | 6.18e-08 | 3 |
natural killer cell | 8.10e-08 | 3 |
pro-NK cell | 8.10e-08 | 3 |
naive T cell | 1.48e-07 | 3 |