FFCP PHASE1:Hg19::chr1:197657822..197657832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37909 | |HGNC=37909 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-57bp_to_ENST00000418613_5end | |association_with_transcript=-57bp_to_ENST00000418613_5end | ||
|cluster_id=chr1:197657822..197657832,+ | |||
|description=CAGE_peak_1_at_EEF1A1P32_5end | |description=CAGE_peak_1_at_EEF1A1P32_5end | ||
|id=chr1:197657822..197657832,+ | |id=chr1:197657822..197657832,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.29e-60;3!CL:0000622;1.67e-36;5!CL:0000154;1.45e-30;6!CL:0000946;5.16e-21;1!CL:0002591;5.16e-21;1!CL:0000786;5.16e-21;1!CL:0000150;1.20e-20;9!CL:0002251;1.16e-09;20!CL:0000151;2.97e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.98e-60,3;CL:0000622,1.57e-36,5;CL:0000154,1.38e-30,6;CL:0000946,7.72e-21,1;CL:0000786,7.72e-21,1;CL:0000980,7.72e-21,1;CL:0002591,9.43e-21,1;CL:0000150,1.16e-20,9;CL:0000785,4.09e-11,2;CL:0000955,4.09e-11,2;CL:0000818,4.09e-11,2;CL:0000954,4.09e-11,2;CL:0000816,4.09e-11,2;CL:0002251,1.14e-09,20;CL:0000151,3.20e-09,36;CL:0002076,5.91e-08,42;CL:0000817,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.34e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;6.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,5.93e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.45e-30;6!UBERON:0003293;1.45e-30;6!UBERON:0003294;1.45e-30;6!UBERON:0010047;1.45e-30;6!UBERON:0003408;1.45e-30;6!UBERON:0000167;1.45e-30;6!UBERON:0001041;1.57e-13;14!UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0000161;3.86e-10;19!UBERON:0000166;3.86e-10;19!UBERON:0000165;4.58e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.38e-30,6;UBERON:0003293,1.38e-30,6;UBERON:0003294,1.38e-30,6;UBERON:0010047,1.38e-30,6;UBERON:0000167,1.38e-30,6;UBERON:0003408,1.14e-18,10;UBERON:0000078,4.52e-11,2;UBERON:0007497,4.52e-11,2;UBERON:0003643,4.52e-11,2;UBERON:0003504,4.52e-11,2;UBERON:0003469,4.52e-11,2;UBERON:0003496,4.52e-11,2;UBERON:0002012,4.52e-11,2;UBERON:0008886,4.52e-11,2;UBERON:0007303,4.52e-11,2;UBERON:0002061,4.52e-11,2;UBERON:0005432,4.52e-11,2;UBERON:0004363,4.52e-11,2;UBERON:0000166,7.61e-09,22;UBERON:0004145,8.29e-08,3;UBERON:0000165,7.62e-07,29;UBERON:0000930,7.62e-07,29;UBERON:0001004,7.92e-07,74 | |||
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| |phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.458480434487708,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0.755751887377619,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.561643155732475,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0,0,0.975789649036763,0.795178609928912,1.39432731443422,0.932949495138334,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,1.85194205030644,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.719792448923265,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0,0.179515288819544,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0.264768380074501,0,0,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0,0.26961417541674,0,0.0846733320657845,0,0.272406812223151,0,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0.211200673038813,1.43429871466276,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0,0.0620964029413835,0.830091809617385,0,0,0.285465333544967,0,0,0,0,0.467426619694449,2.21922344601045,0.189403005275089,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0.322231671127465,0.464033759878494,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.138258436151731,0.584580926518165,0,0.163565394255844,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,1.15233987555779,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,2.48659396995644,3.414369541879,1.38251932362818,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,1.24082554265728,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0.475680363110274,0,0.549702583727146,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.128915775947154,0.09994115592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| ||
|short_description=p1@EEF1A1P32 | |short_description=p1@EEF1A1P32 | ||
}} | }} |
Latest revision as of 13:09, 19 September 2015
Short description: | p1@EEF1A1P32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EEF1A1P32_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_ENST00000418613_5end |
EntrezGene: | NA |
HGNC: | 37909 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.98e-60 | 3 |
acinar cell | 1.57e-36 | 5 |
protein secreting cell | 1.38e-30 | 6 |
antibody secreting cell | 7.72e-21 | 1 |
plasma cell | 7.72e-21 | 1 |
plasmablast | 7.72e-21 | 1 |
smooth muscle cell of the pulmonary artery | 9.43e-21 | 1 |
glandular epithelial cell | 1.16e-20 | 9 |
mature B cell | 4.09e-11 | 2 |
pre-B-II cell | 4.09e-11 | 2 |
transitional stage B cell | 4.09e-11 | 2 |
small pre-B-II cell | 4.09e-11 | 2 |
immature B cell | 4.09e-11 | 2 |
epithelial cell of alimentary canal | 1.14e-09 | 20 |
secretory cell | 3.20e-09 | 36 |
endo-epithelial cell | 5.91e-08 | 42 |
precursor B cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.38e-30 | 6 |
gland of oral region | 1.38e-30 | 6 |
gland of foregut | 1.38e-30 | 6 |
oral gland | 1.38e-30 | 6 |
oral cavity | 1.38e-30 | 6 |
gland of gut | 1.14e-18 | 10 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.52e-11 | 2 |
developing epithelial placode | 4.52e-11 | 2 |
respiratory system arterial blood vessel | 4.52e-11 | 2 |
respiratory system blood vessel | 4.52e-11 | 2 |
respiratory system artery | 4.52e-11 | 2 |
head blood vessel | 4.52e-11 | 2 |
pulmonary artery | 4.52e-11 | 2 |
pulmonary vascular system | 4.52e-11 | 2 |
pharyngeal vasculature | 4.52e-11 | 2 |
truncus arteriosus | 4.52e-11 | 2 |
aortic sac | 4.52e-11 | 2 |
pharyngeal arch artery | 4.52e-11 | 2 |
oral opening | 7.61e-09 | 22 |
outflow tract | 8.29e-08 | 3 |
mouth | 7.62e-07 | 29 |
stomodeum | 7.62e-07 | 29 |
respiratory system | 7.92e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 5.93e-08 | 3 |