FFCP PHASE1:Hg19::chr12:57623876..57623891,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6472 | |EntrezGene=6472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10852 | |HGNC=10852 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2Y1 | |UniProt=G3V2Y1 | ||
|association_with_transcript=0bp_to_ENST00000557348_5end | |association_with_transcript=0bp_to_ENST00000557348_5end | ||
|cluster_id=chr12:57623876..57623891,+ | |||
|coexpression_cluster_id=C2221 | |||
|description=CAGE_peak_5_at_SHMT2_5end | |description=CAGE_peak_5_at_SHMT2_5end | ||
|id=chr12:57623876..57623891,+ | |id=chr12:57623876..57623891,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.09e-22!180;CL:0000548!3.34e-14!679;CL:0000004!3.34e-14!679;CL:0000255!3.34e-14!679;CL:0000057!3.84e-14!75;CL:0000012!2.14e-13!682;CL:0002371!9.00e-10!591;CL:0000144!3.54e-09!625;CL:0000192!1.14e-08!42;CL:0000514!1.14e-08!42;CL:0000359!2.03e-08!32;CL:0000003!2.40e-08!722;CL:0000680!7.07e-08!57;CL:0000056!7.07e-08!57;CL:0000355!7.07e-08!57;CL:0000183!1.28e-07!59;CL:0000187!2.25e-07!54;CL:0000220!2.69e-07!246;CL:0002321!4.94e-07!248 | |ontology_enrichment_celltype=CL:0000055!3.09e-22!180;CL:0000548!3.34e-14!679;CL:0000004!3.34e-14!679;CL:0000255!3.34e-14!679;CL:0000057!3.84e-14!75;CL:0000012!2.14e-13!682;CL:0002371!9.00e-10!591;CL:0000144!3.54e-09!625;CL:0000192!1.14e-08!42;CL:0000514!1.14e-08!42;CL:0000359!2.03e-08!32;CL:0000003!2.40e-08!722;CL:0000680!7.07e-08!57;CL:0000056!7.07e-08!57;CL:0000355!7.07e-08!57;CL:0000183!1.28e-07!59;CL:0000187!2.25e-07!54;CL:0000220!2.69e-07!246;CL:0002321!4.94e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000057;5.59e-08;73!CL:0000359;1.07e-07;32!CL:0000192;9.43e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-14,76;CL:0000192,9.59e-09,43;CL:0000514,9.59e-09,43;CL:0000723,1.43e-08,433;CL:0000359,1.49e-08,32;CL:0000048,1.57e-08,427;CL:0000034,9.99e-08,441;CL:0000680,6.19e-07,58;CL:0000056,6.19e-07,58;CL:0000355,6.19e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;9.43e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!7.43e-09!216;UBERON:0001637!4.40e-08!42;UBERON:0003509!4.40e-08!42;UBERON:0004572!4.40e-08!42;UBERON:0000475!5.17e-08!365;UBERON:0005256!2.27e-07!143;UBERON:0000914!2.71e-07!83;UBERON:0002329!2.71e-07!83;UBERON:0003077!2.71e-07!83;UBERON:0003059!2.71e-07!83;UBERON:0007282!2.71e-07!83;UBERON:0009618!2.71e-07!83;UBERON:0007285!2.71e-07!83 | |ontology_enrichment_uberon=UBERON:0002100!7.43e-09!216;UBERON:0001637!4.40e-08!42;UBERON:0003509!4.40e-08!42;UBERON:0004572!4.40e-08!42;UBERON:0000475!5.17e-08!365;UBERON:0005256!2.27e-07!143;UBERON:0000914!2.71e-07!83;UBERON:0002329!2.71e-07!83;UBERON:0003077!2.71e-07!83;UBERON:0003059!2.71e-07!83;UBERON:0007282!2.71e-07!83;UBERON:0009618!2.71e-07!83;UBERON:0007285!2.71e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.36e-07,42;UBERON:0003509,4.36e-07,42;UBERON:0004572,4.36e-07,42;UBERON:0002100,7.54e-07,199 | |||
|phase1_expression=4.72363786103447,2.14100523890983,4.93340414335899,2.00146596706261,3.5756887554183,1.74467704820074,0,3.79031924056099,1.04474251279935,0.737201809504527,2.09340350391728,0.873765488520689,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,1.56727360739044,0,0.136874425072884,0.251085279189606,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0.464448369948228,0,1.8072355126695,5.17655614233503,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0,0.962787081228281,0,0,0.199463657621632,0,1.16083695451434,2.26954089876456,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.443067789167242,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,2.17366355134002,2.53007406669196,4.01070328508712,4.34539556882471,3.1811437882044,6.8128881842369,0.283604451492204,0.221729397462564,0,0.196468613246569,4.00724817121796,0.741568885568859,0.649094787309367,0.696518949197069,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,1.37559020970034,0.626984899610432,0.258416759169329,0,0,0.402829317109147,0,0,0.735326160691737,0.81014194788176,0,0.22452937262617,0,0,1.89853131913626,0,0,0,1.74437620857014,5.96366342034382,2.40597972162702,1.58891016975863,0.573673241497627,1.06400514659507,2.24271040056923,4.2699598291882,4.19334832309172,0.311211035399766,0.808264032418128,0.163461903113459,1.21085942115945,1.72852777344,5.15507150034353,0.936480230490962,2.2818872861778,1.34503812496621,1.17434498643765,1.45685649931318,0.98315564691574,1.22492502752936,0.982674538494144,4.02970546585485,2.37600571456411,3.70900393917835,3.64064544775211,9.3420358436111,1.17835279767846,1.37630371859161,1.38532057742091,1.31693286264251,3.37136575378922,4.35690370829131,1.70148274740032,1.25572744982203,1.49490172172997,1.90738711043606,0.300091096084402,2.37020817248409,1.03056216018252,6.32797311527405,1.0126579934476,2.72823614451356,2.77677151668526,4.14224543890347,1.2931684545505,1.06502877754984,1.10827308050404,0.339121184620975,0,0.272746120590835,0,0,0.265059536642971,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.505754070234305,0.723033089650446,0.55146986366197,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,1.15424147083917,0,2.80483547606892,0,0,5.07020139287323,0.982827216677626,2.36315962672562,0,0.245976877086227,2.05881372358231,0.439001141634502,5.62008766288098,0.502644862058154,1.01847289674383,7.16778271682714,4.15973914111831,0,0.231860809950154,1.76113041353732,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.283550194484773,2.23896306757121,1.74380363108377,1.53353071666084,0,0.528290604079356,0.207328115540772,0,0.25248486685276,0.888970520090367,3.81988425558278,0,5.13217338068116,1.64523988325318,0.901029173531752,1.14330573052231,0.897048674762886,0.43596006883328,0.80672114403045,1.80980402060889,7.15312891703765,0,2.92531928243358,5.2003718455683,0.771622122786426,1.41849132023278,1.0656887160644,3.0025378668211,8.68194568626309,0,0.977208552881205,3.55391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0,2.43247561282381,1.00451418286425,0,3.35474797688216,3.44585807502342,0,1.73737568001095,1.43833425785268,0.716243852959582,1.12085143993527,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,2.98391526069709,2.49565033836969,3.03329280955175,4.88877486605197,4.80279801470124,6.3198680942821,9.09630016223939,6.2083842775503,1.32845119707087,1.65932251687533,1.73767228936166,2.93701736194111,1.02943027143257,0,0.215714200818617,0,1.21251028578504,0,2.11673205330776,2.72918588600655,1.68808170616869,5.89386198309454,3.33161788064823,2.55853624533352,4.50390979202101,5.93672265779964,0.771048469013278,1.59805552781814,0.574890092096664,0.519254429183621,0.348631135379878,0,0.200506470303285,1.28913384510255,3.21480454860899,2.1850940160806,2.75361271414791,3.15839729035188,0.770153371044148,1.56869953835371,0,0,0,0.340187410553031,0.647747748306418,0,0.541892875087706,0.501689773854853,0,1.66215201785745,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,1.44257416306811,1.00726411300178,0.165018999841176,0.574265537996172,0,1.6068392984416,1.7400729292582,0.770243085573222,0.307007349452259,0.275673144969061,1.07420244868274,0.435050081742686,0.767039646744908,0.712256285173899,2.31398881505369,2.69066094311149,0.127612712494584,2.52894452138875,6.507837690162,1.25924938732256,2.0911118104818,1.23213432070436,3.72614221221915,2.60979897622522,3.89180860118232,2.57624796135584,0.744316738719335,0.316379424718726,0.571890581771475,1.02359116524534,2.99557291623744,1.59101623962968,3.13979456079692,0,0.274537029736055,0.589062011728432,4.04364963146632,4.75530963519025,0.421258456238981,0.48763373908959,1.94970791705028,0,1.9109987597118,1.97967604735198,7.910568163417,3.85955740482287,2.65375590096488,2.19225442626881,3.47265320560013,0.655894752046633,5.0727594240676,1.8589409885985,3.66204283291914,0.860468113224309,4.02821068153797,5.7067368237,1.41904425628239,2.32218398827431,3.29294892959902,0.75894634753143,2.44954304171488,4.52243929809907,0.670302275535787,3.26672954583968,1.60044461320525,1.72202149068492,3.36942951335251,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.557409525377156,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0.47003968731907,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0.614481528616916,0.447352215784832,0.166849141711909,0.390776190804081,0.835218521685727,0,0.811367035427949,0,0,1.12284324244932,0,0,0.780103689942349,0.568272293612826,0,0,0,0,0.562677665642051,3.45056985571008,0.659215496907038,0,0.597743964753209,0,0,0.306806047506464,0.615424027305347,1.55519793830904,1.61763032065188,0.179021174675609,0,0,0,2.22273980289274,0,0.185536196323703,0,1.30213880542617,0.437299999980979,0.724999575434793,1.82069517256799,0,0,0,0,0.694499979733169,0.885741385813839,0.723578631752448,0,0.442317039724898,0.295547618953547,0.658156191461918,1.41620002574687,0.83654246567162,0.0769502585037971,1.36730467016401,0,0.448788222048861,0.54323685961004,0.957003479195758,1.64875668123352,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0.889563386041866,0.494255755786011,0.835375596043643,0.539209063845416,0,0.702793337176017,0.91227394607833,0.586993856796269,0.728341138602278,0,1.20990716048664,0,0.252746318513952,4.96067284067825,0.103688191397247,1.32930774541437,0.661983911750998,1.56966459203613,1.19472429772959,0.569219092059585,2.91216813327591,0,0.783939179315021,0.609414446062818,0.17472666824203,0.171986032471617,1.54810130062536,1.5348756588099,1.31384731285135,0.193978032976839,0.264768380074501,0.677942222341597,1.64450309576101,0,0.379864775735272,0.391102765469606,0.160317640503067,0.213452994739353,3.39676336289621,0.576361668616424,0.229073192331831,0.686379991447858,0.720273989940749,0.372757606696298,0.942776138467182,0.815425236441684,0.627617077873999,0.713987523454252,1.73370353940911,0,0.273810757783986,0,2.14882720709979,0.525774708558629,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,2.52209918479682,0,0.86661500537946,0.412079291905832,0.674035438541849,1.27955725969173,0.846733320657845,0,0.544813624446302,0.321506296930038,0,0.415440338029185,0,0,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0.950403028674658,2.15144807199414,1.91915197319445,0,0,0,0,0.864221491201268,0.326587360109409,1.19730191562487,0.574647645245373,0.340776043570843,0.453248366080503,4.9827759450548,1.32506888912221,0.129282956361551,0.52893040697076,1.36869470307464,0,0.106787412567695,0,0,0,0.592834895693833,0.121792598380896,1.91502377331055,0,0.2506898940227,0,0.327872630709804,1.09937867375164,0.886068179966986,0,0.250381861413,0.573409195690071,0.776503360757966,0.620964029413834,0.138348634936231,0.124980407962107,4.09452617362449,1.7127920012698,2.58792401667989,0,0,1.79105763464249,3.97312626740282,1.66441758450784,1.13641803165053,3.0188148210309,1.77962244319307,5.94984177832001,3.78077309408098,0.777186002913902,1.03498604992744,0.318593534327405,4.04822800947244,1.08684069813382,1.65882483136342,2.92425886013794,1.5652351854352,1.50257608997218,1.52322084867518,0,2.00033525122815,2.36303225493475,1.39210127963548,1.99047944349308,0.400027764663154,2.74716564146234,3.36749488765919,2.52369796457302,0.770479321629213,0.214441591374926,1.56596575179127,0.226705925512272,0.463044948647668,1.46842022703881,0.358177682162975,0.617602894321944,1.53498834705095,0.353378291891762,1.15748422962549,0.675769762612291,0.512483037175893,1.0362910251936,0.911579868532147,0.276516872303462,0,0,0,4.58653788384978,0.245772908753719,1.69049698686902,0,0.213383459388282,2.75543967457305,1.13503190713367,0.368211900503681,2.23807212351111,1.24415452006595,0,0.107824811396682,0.786329709279482,0.109209638192014,0,0,0,0,3.81605220784102,0.157723490002507,0,3.17408349321616,3.062454773532,0.449604575675217,0,0.159633859057151,0.205116364240755,0,0.414943514785307,0.161475645631851,0,2.64998839952769,0.353909170043221,0.733714394086716,1.03973099535304,3.05105676373734,0,0.596748666348824,0.150420656698515,1.0085253435176,0,0,3.27543835020193,0.591424344868181,0.607838261565552,0.781078098613847,0.206686796501184,0.570742291745161,0,3.83780436800028,0,0,1.78867398695433,0,0,0,0,0.354809480650555,0.691403925334676,1.71488009437418,0.543757863814654,0.460409414939944,0.590969204419841,0.667388411352415,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0.9555033757741,0.428859265059938,0,0.464965701472501,0,1.60342272946051,0.207216164163037,0.17071847709395,0,0,1.06498800657509,1.36341447614652,0,0,1.24082554265728,0,0.671132590786754,1.07965256976767,0.487671699929078,0,0,1.1598144313382,0.485710993059139,0.467878926924211,0.198950775161368,0,0.90356865631168,0,1.81155412280008,0,0,1.41095188908457,0,3.53514820652439,0,0.297046400327086,0,4.24817786719542,0,0.0644578879735772,0.299823467774787,0.71421575442263,3.17605384544123,0.882655033580851,0,0,1.00337708206016,0.315543124386369,0.543931921527318,0,0.5290268405154,1.11598505450025,0.924351257262837,0.432626562123789,0.252332849670158,0,0,0.203977659483963,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,1.00918676322552,0.0636471582781649,0.404234377916439,0,0,0.404112318087525,0.502055437748735,0.99798106963804,0.651226148887796,1.92109222579888,0,3.95230889268982,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=4.72363786103447,2.14100523890983,4.93340414335899,2.00146596706261,3.5756887554183,1.74467704820074,0,3.79031924056099,1.04474251279935,0.737201809504527,2.09340350391728,0.873765488520689,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,1.56727360739044,0,0.136874425072884,0.251085279189606,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0.464448369948228,0,1.8072355126695,5.17655614233503,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0,0.962787081228281,0,0,0.199463657621632,0,1.16083695451434,2.26954089876456,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.443067789167242,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,2.17366355134002,2.53007406669196,4.01070328508712,4.34539556882471,3.1811437882044,6.8128881842369,0.283604451492204,0.221729397462564,0,0.196468613246569,4.00724817121796,0.741568885568859,0.649094787309367,0.696518949197069,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,1.37559020970034,0.626984899610432,0.258416759169329,0,0,0.402829317109147,0,0,0.735326160691737,0.81014194788176,0,0.22452937262617,0,0,1.89853131913626,0,0,0,1.74437620857014,5.96366342034382,2.40597972162702,1.58891016975863,0.573673241497627,1.06400514659507,2.24271040056923,4.2699598291882,4.19334832309172,0.311211035399766,0.808264032418128,0.163461903113459,1.21085942115945,1.72852777344,5.15507150034353,0.936480230490962,2.2818872861778,1.34503812496621,1.17434498643765,1.45685649931318,0.98315564691574,1.22492502752936,0.982674538494144,4.02970546585485,2.37600571456411,3.70900393917835,3.64064544775211,9.3420358436111,1.17835279767846,1.37630371859161,1.38532057742091,1.31693286264251,3.37136575378922,4.35690370829131,1.70148274740032,1.25572744982203,1.49490172172997,1.90738711043606,0.300091096084402,2.37020817248409,1.03056216018252,6.32797311527405,1.0126579934476,2.72823614451356,2.77677151668526,4.14224543890347,1.2931684545505,1.06502877754984,1.10827308050404,0.339121184620975,0,0.272746120590835,0,0,0.265059536642971,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.505754070234305,0.723033089650446,0.55146986366197,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,1.15424147083917,0,2.80483547606892,0,0,5.07020139287323,0.982827216677626,2.36315962672562,0,0.245976877086227,2.05881372358231,0.439001141634502,5.62008766288098,0.502644862058154,1.01847289674383,7.16778271682714,4.15973914111831,0,0.231860809950154,1.76113041353732,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.283550194484773,2.23896306757121,1.74380363108377,1.53353071666084,0,0.528290604079356,0.207328115540772,0,0.25248486685276,0.888970520090367,3.81988425558278,0,5.13217338068116,1.64523988325318,0.901029173531752,1.14330573052231,0.897048674762886,0.43596006883328,0.80672114403045,1.80980402060889,7.15312891703765,0,2.92531928243358,5.2003718455683,0.771622122786426,1.41849132023278,1.0656887160644,3.0025378668211,8.68194568626309,0,0.977208552881205,3.55391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0,2.43247561282381,1.00451418286425,0,3.35474797688216,3.44585807502342,0,1.73737568001095,1.43833425785268,0.716243852959582,1.12085143993527,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,2.98391526069709,2.49565033836969,3.03329280955175,4.88877486605197,4.80279801470124,6.3198680942821,9.09630016223939,6.2083842775503,1.32845119707087,1.65932251687533,1.73767228936166,2.93701736194111,1.02943027143257,0,0.215714200818617,0,1.21251028578504,0,2.11673205330776,2.72918588600655,1.68808170616869,5.89386198309454,3.33161788064823,2.55853624533352,4.50390979202101,5.93672265779964,0.771048469013278,1.59805552781814,0.574890092096664,0.519254429183621,0.348631135379878,0,0.200506470303285,1.28913384510255,3.21480454860899,2.1850940160806,2.75361271414791,3.15839729035188,0.770153371044148,1.56869953835371,0,0,0,0.340187410553031,0.647747748306418,0,0.541892875087706,0.501689773854853,0,1.66215201785745,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,1.44257416306811,1.00726411300178,0.165018999841176,0.574265537996172,0,1.6068392984416,1.7400729292582,0.770243085573222,0.307007349452259,0.275673144969061,1.07420244868274,0.435050081742686,0.767039646744908,0.712256285173899,2.31398881505369,2.69066094311149,0.127612712494584,2.52894452138875,6.507837690162,1.25924938732256,2.0911118104818,1.23213432070436,3.72614221221915,2.60979897622522,3.89180860118232,2.57624796135584,0.744316738719335,0.316379424718726,0.571890581771475,1.02359116524534,2.99557291623744,1.59101623962968,3.13979456079692,0,0.274537029736055,0.589062011728432,4.04364963146632,4.75530963519025,0.421258456238981,0.48763373908959,1.94970791705028,0,1.9109987597118,1.97967604735198,7.910568163417,3.85955740482287,2.65375590096488,2.19225442626881,3.47265320560013,0.655894752046633,5.0727594240676,1.8589409885985,3.66204283291914,0.860468113224309,4.02821068153797,5.7067368237,1.41904425628239,2.32218398827431,3.29294892959902,0.75894634753143,2.44954304171488,4.52243929809907,0.670302275535787,3.26672954583968,1.60044461320525,1.72202149068492,3.36942951335251,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.557409525377156,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0.47003968731907,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0.614481528616916,0.447352215784832,0.166849141711909,0.390776190804081,0.835218521685727,0,0.811367035427949,0,0,1.12284324244932,0,0,0.780103689942349,0.568272293612826,0,0,0,0,0.562677665642051,3.45056985571008,0.659215496907038,0,0.597743964753209,0,0,0.306806047506464,0.615424027305347,1.55519793830904,1.61763032065188,0.179021174675609,0,0,0,2.22273980289274,0,0.185536196323703,0,1.30213880542617,0.437299999980979,0.724999575434793,1.82069517256799,0,0,0,0,0.694499979733169,0.885741385813839,0.723578631752448,0,0.442317039724898,0.295547618953547,0.658156191461918,1.41620002574687,0.83654246567162,0.0769502585037971,1.36730467016401,0,0.448788222048861,0.54323685961004,0.957003479195758,1.64875668123352,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0.889563386041866,0.494255755786011,0.835375596043643,0.539209063845416,0,0.702793337176017,0.91227394607833,0.586993856796269,0.728341138602278,0,1.20990716048664,0,0.252746318513952,4.96067284067825,0.103688191397247,1.32930774541437,0.661983911750998,1.56966459203613,1.19472429772959,0.569219092059585,2.91216813327591,0,0.783939179315021,0.609414446062818,0.17472666824203,0.171986032471617,1.54810130062536,1.5348756588099,1.31384731285135,0.193978032976839,0.264768380074501,0.677942222341597,1.64450309576101,0,0.379864775735272,0.391102765469606,0.160317640503067,0.213452994739353,3.39676336289621,0.576361668616424,0.229073192331831,0.686379991447858,0.720273989940749,0.372757606696298,0.942776138467182,0.815425236441684,0.627617077873999,0.713987523454252,1.73370353940911,0,0.273810757783986,0,2.14882720709979,0.525774708558629,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,2.52209918479682,0,0.86661500537946,0.412079291905832,0.674035438541849,1.27955725969173,0.846733320657845,0,0.544813624446302,0.321506296930038,0,0.415440338029185,0,0,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0.950403028674658,2.15144807199414,1.91915197319445,0,0,0,0,0.864221491201268,0.326587360109409,1.19730191562487,0.574647645245373,0.340776043570843,0.453248366080503,4.9827759450548,1.32506888912221,0.129282956361551,0.52893040697076,1.36869470307464,0,0.106787412567695,0,0,0,0.592834895693833,0.121792598380896,1.91502377331055,0,0.2506898940227,0,0.327872630709804,1.09937867375164,0.886068179966986,0,0.250381861413,0.573409195690071,0.776503360757966,0.620964029413834,0.138348634936231,0.124980407962107,4.09452617362449,1.7127920012698,2.58792401667989,0,0,1.79105763464249,3.97312626740282,1.66441758450784,1.13641803165053,3.0188148210309,1.77962244319307,5.94984177832001,3.78077309408098,0.777186002913902,1.03498604992744,0.318593534327405,4.04822800947244,1.08684069813382,1.65882483136342,2.92425886013794,1.5652351854352,1.50257608997218,1.52322084867518,0,2.00033525122815,2.36303225493475,1.39210127963548,1.99047944349308,0.400027764663154,2.74716564146234,3.36749488765919,2.52369796457302,0.770479321629213,0.214441591374926,1.56596575179127,0.226705925512272,0.463044948647668,1.46842022703881,0.358177682162975,0.617602894321944,1.53498834705095,0.353378291891762,1.15748422962549,0.675769762612291,0.512483037175893,1.0362910251936,0.911579868532147,0.276516872303462,0,0,0,4.58653788384978,0.245772908753719,1.69049698686902,0,0.213383459388282,2.75543967457305,1.13503190713367,0.368211900503681,2.23807212351111,1.24415452006595,0,0.107824811396682,0.786329709279482,0.109209638192014,0,0,0,0,3.81605220784102,0.157723490002507,0,3.17408349321616,3.062454773532,0.449604575675217,0,0.159633859057151,0.205116364240755,0,0.414943514785307,0.161475645631851,0,2.64998839952769,0.353909170043221,0.733714394086716,1.03973099535304,3.05105676373734,0,0.596748666348824,0.150420656698515,1.0085253435176,0,0,3.27543835020193,0.591424344868181,0.607838261565552,0.781078098613847,0.206686796501184,0.570742291745161,0,3.83780436800028,0,0,1.78867398695433,0,0,0,0,0.354809480650555,0.691403925334676,1.71488009437418,0.543757863814654,0.460409414939944,0.590969204419841,0.667388411352415,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0.9555033757741,0.428859265059938,0,0.464965701472501,0,1.60342272946051,0.207216164163037,0.17071847709395,0,0,1.06498800657509,1.36341447614652,0,0,1.24082554265728,0,0.671132590786754,1.07965256976767,0.487671699929078,0,0,1.1598144313382,0.485710993059139,0.467878926924211,0.198950775161368,0,0.90356865631168,0,1.81155412280008,0,0,1.41095188908457,0,3.53514820652439,0,0.297046400327086,0,4.24817786719542,0,0.0644578879735772,0.299823467774787,0.71421575442263,3.17605384544123,0.882655033580851,0,0,1.00337708206016,0.315543124386369,0.543931921527318,0,0.5290268405154,1.11598505450025,0.924351257262837,0.432626562123789,0.252332849670158,0,0,0.203977659483963,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,1.00918676322552,0.0636471582781649,0.404234377916439,0,0,0.404112318087525,0.502055437748735,0.99798106963804,0.651226148887796,1.92109222579888,0,3.95230889268982,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p5@SHMT2 | |short_description=p5@SHMT2 | ||
}} | }} |
Latest revision as of 13:35, 19 September 2015
Short description: | p5@SHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SHMT2_5end |
Coexpression cluster: | C2221_Mesenchymal_Fibroblast_Keratocytes_Keratinocyte_Osteoblast_mesenchymal_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000557348_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | G3V2Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.05e-14 | 76 |
smooth muscle cell | 9.59e-09 | 43 |
smooth muscle myoblast | 9.59e-09 | 43 |
somatic stem cell | 1.43e-08 | 433 |
vascular associated smooth muscle cell | 1.49e-08 | 32 |
multi fate stem cell | 1.57e-08 | 427 |
stem cell | 9.99e-08 | 441 |
muscle precursor cell | 6.19e-07 | 58 |
myoblast | 6.19e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 4.36e-07 | 42 |
arterial blood vessel | 4.36e-07 | 42 |
arterial system | 4.36e-07 | 42 |
trunk | 7.54e-07 | 199 |