FFCP PHASE2:Hg19::chrX:135056134..135056198,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:93380 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:28100 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=93380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=28100 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N4V1 | ||
|association_with_transcript=0bp_to_NM_173470,uc004ezi.1,uc011mvw.1_5end | |association_with_transcript=0bp_to_NM_173470,uc004ezi.1,uc011mvw.1_5end | ||
|cluster_id=chrX:135056134..135056198,- | |cluster_id=chrX:135056134..135056198,- | ||
Latest revision as of 13:54, 19 September 2015
| Short description: | p1@MMGT1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_MMGT1_5end |
| Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
| Association with transcript: | 0bp_to_NM_173470, uc004ezi.1, uc011mvw.1_5end |
| EntrezGene: | MMGT1 |
| HGNC: | 28100 |
| UniProt: | Q8N4V1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@MMGT1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 1.17e-43 | 136 |
| hematopoietic lineage restricted progenitor cell | 1.81e-34 | 120 |
| hematopoietic stem cell | 4.38e-34 | 168 |
| nongranular leukocyte | 6.48e-34 | 115 |
| hematopoietic cell | 3.17e-33 | 177 |
| hematopoietic oligopotent progenitor cell | 1.77e-31 | 161 |
| hematopoietic multipotent progenitor cell | 1.77e-31 | 161 |
| myeloid leukocyte | 1.37e-28 | 72 |
| granulocyte monocyte progenitor cell | 1.73e-24 | 67 |
| defensive cell | 8.79e-24 | 48 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.98e-27 | 98 |
| blood island | 2.98e-27 | 98 |
| hemolymphoid system | 5.25e-24 | 108 |
| bone marrow | 1.02e-20 | 76 |
| bone element | 4.05e-19 | 82 |
| immune system | 6.92e-19 | 93 |
| skeletal element | 9.69e-18 | 90 |
| skeletal system | 2.59e-16 | 100 |
| connective tissue | 1.78e-09 | 371 |
| adult organism | 3.94e-09 | 114 |
Showing 1 to 10 of 10 entries
