FFCP PHASE1:Hg19::chr6:105405988..105406001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389421 | |EntrezGene=389421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32207 | |HGNC=32207 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_uc010kda.1_5end | |association_with_transcript=14bp_to_uc010kda.1_5end | ||
|cluster_id=chr6:105405988..105406001,+ | |||
|coexpression_cluster_id=C4539 | |||
|description=CAGE_peak_6_at_LIN28B_5end | |description=CAGE_peak_6_at_LIN28B_5end | ||
|id=chr6:105405988..105406001,+ | |id=chr6:105405988..105406001,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.36e-18!5;CL:0000039!5.65e-08!7;CL:0000586!5.65e-08!7 | |ontology_enrichment_celltype=CL:0002322!1.36e-18!5;CL:0000039!5.65e-08!7;CL:0000586!5.65e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.76e-44;5!CL:0002321;1.37e-20;15!CL:0000540;1.18e-13;6!CL:0000404;1.18e-13;6!CL:0000182;9.38e-12;12!CL:0000148;2.11e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.19e-44,5;CL:0000540,1.29e-13,6;CL:0000031,1.29e-13,6;CL:0000404,1.29e-13,6;CL:0000182,9.93e-12,12;CL:0000047,2.38e-10,8;CL:0000148,1.81e-08,10;CL:0000541,1.81e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.18e-13;6!UBERON:0004161;8.37e-13;11!UBERON:0009497;7.27e-11;13!UBERON:0003104;7.45e-07;31 | |||
|ontology_enrichment_disease=DOID:3095!2.62e-16!22;DOID:2994!2.62e-16!22;DOID:162!7.79e-15!235;DOID:14566!2.54e-14!239;DOID:0050687!4.41e-10!143;DOID:169!7.62e-09!6;DOID:171!6.79e-08!10;DOID:8692!1.80e-07!31;DOID:1036!2.16e-07!8;DOID:74!2.46e-07!2;DOID:2531!4.76e-07!51;DOID:0060083!4.76e-07!51;DOID:1240!7.61e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.63e-17;8!DOID:8692;4.85e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.63e-17,8;DOID:8692,7.98e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.75e-07;19!UBERON:0006925;1.75e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.82e-07,19;UBERON:0006925,1.82e-07,19;UBERON:0008836,1.82e-07,19 | |||
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| ||
|short_description=p6@LIN28B | |short_description=p6@LIN28B | ||
}} | }} |
Latest revision as of 13:58, 19 September 2015
Short description: | p6@LIN28B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LIN28B_5end |
Coexpression cluster: | C4539_H9_chronic_testicular_HES3GFP_iPS_embryonic_anaplastic |
Association with transcript: | 14bp_to_uc010kda.1_5end |
EntrezGene: | LIN28B |
HGNC: | 32207 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.19e-44 | 5 |
neuron | 1.29e-13 | 6 |
neuroblast | 1.29e-13 | 6 |
electrically signaling cell | 1.29e-13 | 6 |
hepatocyte | 9.93e-12 | 12 |
neuronal stem cell | 2.38e-10 | 8 |
melanocyte | 1.81e-08 | 10 |
melanoblast | 1.81e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 1.82e-07 | 19 |
digestive gland | 1.82e-07 | 19 |
liver bud | 1.82e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.63e-17 | 8 |
myeloid leukemia | 7.98e-07 | 31 |