FFCP PHASE1:Hg19::chr6:10556215..10556227,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q06430 | |UniProt=Q06430 | ||
|association_with_transcript=-12bp_to_ENST00000316170_5end | |association_with_transcript=-12bp_to_ENST00000316170_5end | ||
|cluster_id=chr6:10556215..10556227,+ | |||
|description=CAGE_peak_23_at_GCNT2_5end | |description=CAGE_peak_23_at_GCNT2_5end | ||
|id=chr6:10556215..10556227,+ | |id=chr6:10556215..10556227,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.61e-12!5;CL:0002139!4.67e-10!24;CL:0000540!4.91e-10!6;CL:0000031!4.91e-10!6;CL:0000404!4.91e-10!6;CL:0002144!9.93e-09!3;CL:0000047!2.05e-07!8;CL:0000071!2.91e-07!18;CL:0002546!2.91e-07!18 | |ontology_enrichment_celltype=CL:0002322!7.61e-12!5;CL:0002139!4.67e-10!24;CL:0000540!4.91e-10!6;CL:0000031!4.91e-10!6;CL:0000404!4.91e-10!6;CL:0002144!9.93e-09!3;CL:0000047!2.05e-07!8;CL:0000071!2.91e-07!18;CL:0002546!2.91e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002144;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.59e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.25e-45;3!UBERON:0004874;7.05e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.87e-26!82;UBERON:0005743!7.27e-26!86;UBERON:0000073!4.13e-24!94;UBERON:0001016!4.13e-24!94;UBERON:0007023!2.17e-21!115;UBERON:0001049!2.49e-18!57;UBERON:0005068!2.49e-18!57;UBERON:0006241!2.49e-18!57;UBERON:0007135!2.49e-18!57;UBERON:0000955!1.11e-17!69;UBERON:0006238!1.11e-17!69;UBERON:0002616!3.82e-14!59;UBERON:0000924!5.88e-14!173;UBERON:0006601!5.88e-14!173;UBERON:0004121!1.44e-13!169;UBERON:0002346!2.56e-12!90;UBERON:0000033!4.47e-12!123;UBERON:0000153!4.61e-12!129;UBERON:0007811!4.61e-12!129;UBERON:0003075!5.37e-12!86;UBERON:0007284!5.37e-12!86;UBERON:0002780!3.67e-11!41;UBERON:0001890!3.67e-11!41;UBERON:0006240!3.67e-11!41;UBERON:0003080!8.33e-11!42;UBERON:0001893!1.12e-10!34;UBERON:0001869!5.21e-10!32;UBERON:0003076!1.35e-09!15;UBERON:0003057!1.35e-09!15;UBERON:0002791!1.51e-09!33;UBERON:0002619!1.69e-09!22;UBERON:0002020!3.03e-09!34;UBERON:0003528!3.03e-09!34;UBERON:0001915!9.93e-09!3;UBERON:0001982!9.93e-09!3;UBERON:0004111!1.12e-08!241;UBERON:0001950!1.21e-08!20;UBERON:0000956!3.88e-08!25;UBERON:0000203!3.88e-08!25;UBERON:0000025!2.48e-07!194;UBERON:0001986!2.91e-07!18;UBERON:0004638!2.91e-07!18;UBERON:0004852!2.91e-07!18;UBERON:0000468!3.13e-07!659;UBERON:0003056!3.58e-07!61;UBERON:0004733!6.03e-07!12;UBERON:0002028!6.03e-07!12;UBERON:0007277!6.03e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!5.87e-26!82;UBERON:0005743!7.27e-26!86;UBERON:0000073!4.13e-24!94;UBERON:0001016!4.13e-24!94;UBERON:0007023!2.17e-21!115;UBERON:0001049!2.49e-18!57;UBERON:0005068!2.49e-18!57;UBERON:0006241!2.49e-18!57;UBERON:0007135!2.49e-18!57;UBERON:0000955!1.11e-17!69;UBERON:0006238!1.11e-17!69;UBERON:0002616!3.82e-14!59;UBERON:0000924!5.88e-14!173;UBERON:0006601!5.88e-14!173;UBERON:0004121!1.44e-13!169;UBERON:0002346!2.56e-12!90;UBERON:0000033!4.47e-12!123;UBERON:0000153!4.61e-12!129;UBERON:0007811!4.61e-12!129;UBERON:0003075!5.37e-12!86;UBERON:0007284!5.37e-12!86;UBERON:0002780!3.67e-11!41;UBERON:0001890!3.67e-11!41;UBERON:0006240!3.67e-11!41;UBERON:0003080!8.33e-11!42;UBERON:0001893!1.12e-10!34;UBERON:0001869!5.21e-10!32;UBERON:0003076!1.35e-09!15;UBERON:0003057!1.35e-09!15;UBERON:0002791!1.51e-09!33;UBERON:0002619!1.69e-09!22;UBERON:0002020!3.03e-09!34;UBERON:0003528!3.03e-09!34;UBERON:0001915!9.93e-09!3;UBERON:0001982!9.93e-09!3;UBERON:0004111!1.12e-08!241;UBERON:0001950!1.21e-08!20;UBERON:0000956!3.88e-08!25;UBERON:0000203!3.88e-08!25;UBERON:0000025!2.48e-07!194;UBERON:0001986!2.91e-07!18;UBERON:0004638!2.91e-07!18;UBERON:0004852!2.91e-07!18;UBERON:0000468!3.13e-07!659;UBERON:0003056!3.58e-07!61;UBERON:0004733!6.03e-07!12;UBERON:0002028!6.03e-07!12;UBERON:0007277!6.03e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000989;7.05e-34;1!UBERON:0008811;7.05e-34;1!UBERON:0002037;4.34e-23;6!UBERON:0000007;1.07e-17;2!UBERON:0002680;9.04e-16;9!UBERON:0001895;9.04e-16;9!UBERON:0010523;2.89e-12;3!UBERON:0001915;2.89e-12;3!UBERON:0001982;2.89e-12;3!UBERON:0004733;4.30e-12;12!UBERON:0002028;4.30e-12;12!UBERON:0004732;3.05e-11;13!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0001044;7.58e-07;6!UBERON:0003293;7.58e-07;6!UBERON:0003294;7.58e-07;6!UBERON:0010047;7.58e-07;6!UBERON:0003408;7.58e-07;6!UBERON:0000167;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,7.06e-34,1;UBERON:0008811,7.06e-34,1;UBERON:0006258,7.06e-34,1;UBERON:0005876,7.06e-34,1;UBERON:0004874,7.06e-34,1;UBERON:0002037,4.34e-23,6;UBERON:0006215,4.34e-23,6;UBERON:0000007,1.27e-17,2;UBERON:0002680,9.04e-16,9;UBERON:0001895,9.04e-16,9;UBERON:0010092,9.04e-16,9;UBERON:0010523,2.59e-12,3;UBERON:0001915,2.59e-12,3;UBERON:0001982,2.59e-12,3;UBERON:0004733,4.30e-12,12;UBERON:0002028,4.30e-12,12;UBERON:0007277,4.30e-12,12;UBERON:0004732,3.05e-11,13;UBERON:0003076,7.09e-10,15;UBERON:0003057,7.09e-10,15;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0007023,1.11e-07,114;UBERON:0001044,7.58e-07,6;UBERON:0003293,7.58e-07,6;UBERON:0003294,7.58e-07,6;UBERON:0010047,7.58e-07,6;UBERON:0000167,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,1.61131726843659,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,2.87506075821184,2.06883333267483,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,0.310482014706917,0,0.124980407962107,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,1.48863353516788,0.527613733078862,0,0,0,1.21393120847326,0,0,0,0,0.135939465953663,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,0.534434810531121,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,1.61131726843659,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,2.87506075821184,2.06883333267483,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,0.310482014706917,0,0.124980407962107,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,1.48863353516788,0.527613733078862,0,0,0,1.21393120847326,0,0,0,0,0.135939465953663,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,0.534434810531121,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@GCNT2 | |short_description=p23@GCNT2 | ||
}} | }} |
Latest revision as of 14:01, 19 September 2015
Short description: | p23@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000316170_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q06430 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
penis | 7.06e-34 | 1 |
intromittent organ | 7.06e-34 | 1 |
lateral plate mesenchyme | 7.06e-34 | 1 |
undifferentiated genital tubercle | 7.06e-34 | 1 |
somatopleure | 7.06e-34 | 1 |
cerebellum | 4.34e-23 | 6 |
rhombic lip | 4.34e-23 | 6 |
pituitary gland | 1.27e-17 | 2 |
regional part of metencephalon | 9.04e-16 | 9 |
metencephalon | 9.04e-16 | 9 |
future metencephalon | 9.04e-16 | 9 |
microcirculatory vessel | 2.59e-12 | 3 |
endothelium of capillary | 2.59e-12 | 3 |
capillary | 2.59e-12 | 3 |
segmental subdivision of hindbrain | 4.30e-12 | 12 |
hindbrain | 4.30e-12 | 12 |
presumptive hindbrain | 4.30e-12 | 12 |
segmental subdivision of nervous system | 3.05e-11 | 13 |
posterior neural tube | 7.09e-10 | 15 |
chordal neural plate | 7.09e-10 | 15 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
adult organism | 1.11e-07 | 114 |
saliva-secreting gland | 7.58e-07 | 6 |
gland of oral region | 7.58e-07 | 6 |
gland of foregut | 7.58e-07 | 6 |
oral gland | 7.58e-07 | 6 |
oral cavity | 7.58e-07 | 6 |