FFCP PHASE1:Hg19::chr17:33864772..33864789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506736 | |EntrezGene=100506736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33920 | |HGNC=33920 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=90bp_to_ENST00000361112,uc002hjn.2_5end | |association_with_transcript=90bp_to_ENST00000361112,uc002hjn.2_5end | ||
|cluster_id=chr17:33864772..33864789,- | |||
|description=CAGE_peak_3_at_SLFN12L_5end | |description=CAGE_peak_3_at_SLFN12L_5end | ||
|id=chr17:33864772..33864789,- | |id=chr17:33864772..33864789,- | ||
|ontology_enrichment_celltype=CL:0000738!4.73e-27!140;CL:0002087!7.86e-26!119;CL:0000791!5.71e-23!18;CL:0000789!5.71e-23!18;CL:0002420!5.71e-23!18;CL:0002419!5.71e-23!18;CL:0000790!5.71e-23!18;CL:0002031!2.83e-22!124;CL:0000084!7.69e-21!25;CL:0000827!7.69e-21!25;CL:0000037!1.07e-19!172;CL:0000566!1.07e-19!172;CL:0000838!5.43e-19!52;CL:0000988!8.54e-19!182;CL:0002032!9.03e-19!165;CL:0000837!9.03e-19!165;CL:0000542!2.08e-18!53;CL:0000051!2.08e-18!53;CL:0000625!2.03e-15!11;CL:0000766!2.86e-09!76;CL:0000624!3.10e-08!6;CL:0002057!4.22e-08!42;CL:0002194!2.61e-07!63;CL:0000576!2.61e-07!63;CL:0000040!2.61e-07!63;CL:0000559!2.61e-07!63;CL:0000860!3.74e-07!45;CL:0000839!6.39e-07!70;CL:0002009!7.35e-07!65 | |ontology_enrichment_celltype=CL:0000738!4.73e-27!140;CL:0002087!7.86e-26!119;CL:0000791!5.71e-23!18;CL:0000789!5.71e-23!18;CL:0002420!5.71e-23!18;CL:0002419!5.71e-23!18;CL:0000790!5.71e-23!18;CL:0002031!2.83e-22!124;CL:0000084!7.69e-21!25;CL:0000827!7.69e-21!25;CL:0000037!1.07e-19!172;CL:0000566!1.07e-19!172;CL:0000838!5.43e-19!52;CL:0000988!8.54e-19!182;CL:0002032!9.03e-19!165;CL:0000837!9.03e-19!165;CL:0000542!2.08e-18!53;CL:0000051!2.08e-18!53;CL:0000625!2.03e-15!11;CL:0000766!2.86e-09!76;CL:0000624!3.10e-08!6;CL:0002057!4.22e-08!42;CL:0002194!2.61e-07!63;CL:0000576!2.61e-07!63;CL:0000040!2.61e-07!63;CL:0000559!2.61e-07!63;CL:0000860!3.74e-07!45;CL:0000839!6.39e-07!70;CL:0002009!7.35e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.13e-43;18!CL:0000789;5.13e-43;18!CL:0002419;5.13e-43;18!CL:0000084;1.08e-40;25!CL:0000625;2.26e-28;11!CL:0000542;3.13e-18;53!CL:0000624;1.72e-14;6!CL:0002087;2.59e-10;104!CL:0000623;5.53e-09;3!CL:0000898;1.63e-08;3!CL:0000226;9.19e-08;3!CL:0000842;9.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.37e-43,18;CL:0000789,5.37e-43,18;CL:0002420,5.37e-43,18;CL:0002419,5.37e-43,18;CL:0000790,5.37e-43,18;CL:0000084,1.07e-40,25;CL:0000827,1.07e-40,25;CL:0000838,3.45e-37,52;CL:0000542,2.60e-36,53;CL:0000051,2.60e-36,53;CL:0000625,2.49e-28,11;CL:0002087,1.37e-26,115;CL:0000738,8.65e-25,136;CL:0002031,8.63e-21,120;CL:0000037,9.10e-18,168;CL:0000988,2.91e-16,177;CL:0002032,7.91e-16,161;CL:0000837,7.91e-16,161;CL:0000624,1.92e-14,6;CL:0000623,5.76e-09,3;CL:0000825,5.76e-09,3;CL:0000898,1.51e-08,3;CL:0000226,7.98e-08,3;CL:0000842,7.98e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.13e-43;18!CL:0000051;3.13e-18;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.87e-23!115;UBERON:0002390!2.81e-16!102;UBERON:0003061!2.81e-16!102;UBERON:0002193!4.69e-15!112;UBERON:0000178!2.41e-14!15;UBERON:0000179!2.41e-14!15;UBERON:0000463!2.41e-14!15 | |ontology_enrichment_uberon=UBERON:0007023!4.87e-23!115;UBERON:0002390!2.81e-16!102;UBERON:0003061!2.81e-16!102;UBERON:0002193!4.69e-15!112;UBERON:0000178!2.41e-14!15;UBERON:0000179!2.41e-14!15;UBERON:0000463!2.41e-14!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.63e-20;15!UBERON:0000179;3.63e-20;15!UBERON:0000463;3.63e-20;15!UBERON:0002390;7.32e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.74e-20,15;UBERON:0000179,2.74e-20,15;UBERON:0000463,2.74e-20,15;UBERON:0002390,4.62e-08,98;UBERON:0003061,4.62e-08,98;UBERON:0002193,1.56e-07,108 | |||
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|short_description=p3@SLFN12L | |short_description=p3@SLFN12L | ||
}} | }} |
Latest revision as of 15:14, 19 September 2015
Short description: | p3@SLFN12L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLFN12L_5end |
Coexpression cluster: | NA |
Association with transcript: | 90bp_to_ENST00000361112, uc002hjn.2_5end |
EntrezGene: | SLFN12L |
HGNC: | 33920 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.37e-43 | 18 |
alpha-beta T cell | 5.37e-43 | 18 |
immature T cell | 5.37e-43 | 18 |
mature T cell | 5.37e-43 | 18 |
immature alpha-beta T cell | 5.37e-43 | 18 |
T cell | 1.07e-40 | 25 |
pro-T cell | 1.07e-40 | 25 |
lymphoid lineage restricted progenitor cell | 3.45e-37 | 52 |
lymphocyte | 2.60e-36 | 53 |
common lymphoid progenitor | 2.60e-36 | 53 |
CD8-positive, alpha-beta T cell | 2.49e-28 | 11 |
nongranular leukocyte | 1.37e-26 | 115 |
leukocyte | 8.65e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 8.63e-21 | 120 |
hematopoietic stem cell | 9.10e-18 | 168 |
hematopoietic cell | 2.91e-16 | 177 |
hematopoietic oligopotent progenitor cell | 7.91e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.91e-16 | 161 |
CD4-positive, alpha-beta T cell | 1.92e-14 | 6 |
natural killer cell | 5.76e-09 | 3 |
pro-NK cell | 5.76e-09 | 3 |
naive T cell | 1.51e-08 | 3 |
single nucleate cell | 7.98e-08 | 3 |
mononuclear cell | 7.98e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.74e-20 | 15 |
haemolymphatic fluid | 2.74e-20 | 15 |
organism substance | 2.74e-20 | 15 |
hematopoietic system | 4.62e-08 | 98 |
blood island | 4.62e-08 | 98 |
hemolymphoid system | 1.56e-07 | 108 |