FFCP PHASE2:Hg19::chr15:89346739..89346750,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:176 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:319 |TSSclassif...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=319 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 15:44, 19 September 2015
| Short description: | p3@ACAN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ACAN_5end |
| Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
| Association with transcript: | 34bp_to_ENST00000558207_5end |
| EntrezGene: | ACAN |
| HGNC: | 319 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ACAN |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| GAG secreting cell | 2.55e-15 | 9 |
| carbohydrate secreting cell | 2.55e-15 | 9 |
| chondroblast | 2.38e-12 | 6 |
| chondrocyte | 2.38e-12 | 6 |
| osteoblast | 3.43e-10 | 11 |
| osteoprogenitor cell | 3.43e-10 | 11 |
| mesenchyme condensation cell | 3.43e-10 | 11 |
| fibroblast | 6.84e-10 | 76 |
| skin fibroblast | 7.45e-10 | 23 |
| extracellular matrix secreting cell | 1.15e-08 | 15 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| dense regular connective tissue | 2.13e-08 | 3 |
| tendon | 2.13e-08 | 3 |
| regular connective tissue | 2.13e-08 | 3 |
| integument | 8.85e-07 | 46 |
| integumental system | 8.85e-07 | 46 |
Showing 1 to 5 of 5 entries
