FFCP PHASE1:Hg19::chr1:89530986..89531019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2633 | |EntrezGene=2633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4182 | |HGNC=4182 | ||
|TSSclassifier=strong | |||
|UniProt=P32455 | |UniProt=P32455 | ||
|association_with_transcript=23bp_to_ENST00000370473,NM_002053,uc001dmx.2_5end | |association_with_transcript=23bp_to_ENST00000370473,NM_002053,uc001dmx.2_5end | ||
|cluster_id=chr1:89530986..89531019,- | |||
|description=CAGE_peak_2_at_GBP1_5end | |description=CAGE_peak_2_at_GBP1_5end | ||
|id=chr1:89530986..89531019,- | |id=chr1:89530986..89531019,- | ||
|ontology_enrichment_celltype=CL:0000791!9.03e-10!18;CL:0000789!9.03e-10!18;CL:0002420!9.03e-10!18;CL:0002419!9.03e-10!18;CL:0000790!9.03e-10!18;CL:0002087!9.37e-10!119;CL:0000738!2.67e-09!140;CL:0000838!5.69e-09!52;CL:0000084!2.14e-08!25;CL:0000827!2.14e-08!25;CL:0000542!2.52e-08!53;CL:0000051!2.52e-08!53;CL:0002031!2.47e-07!124;CL:0000625!4.02e-07!11 | |ontology_enrichment_celltype=CL:0000791!9.03e-10!18;CL:0000789!9.03e-10!18;CL:0002420!9.03e-10!18;CL:0002419!9.03e-10!18;CL:0000790!9.03e-10!18;CL:0002087!9.37e-10!119;CL:0000738!2.67e-09!140;CL:0000838!5.69e-09!52;CL:0000084!2.14e-08!25;CL:0000827!2.14e-08!25;CL:0000542!2.52e-08!53;CL:0000051!2.52e-08!53;CL:0002031!2.47e-07!124;CL:0000625!4.02e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.18e-10;18!CL:0000789;5.18e-10;18!CL:0002419;5.18e-10;18!CL:0000084;4.74e-08;25!CL:0000625;2.45e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.91e-10,18;CL:0000789,5.91e-10,18;CL:0002420,5.91e-10,18;CL:0002419,5.91e-10,18;CL:0000790,5.91e-10,18;CL:0002087,1.34e-09,115;CL:0000738,7.79e-09,136;CL:0000838,2.02e-08,52;CL:0000084,4.84e-08,25;CL:0000827,4.84e-08,25;CL:0000542,7.01e-08,53;CL:0000051,7.01e-08,53;CL:0000625,3.01e-07,11;CL:0002031,4.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;5.18e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@GBP1 | |short_description=p2@GBP1 | ||
}} | }} |
Latest revision as of 16:29, 19 September 2015
Short description: | p2@GBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000370473, NM_002053, uc001dmx.2_5end |
EntrezGene: | GBP1 |
HGNC: | 4182 |
UniProt: | P32455 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.91e-10 | 18 |
alpha-beta T cell | 5.91e-10 | 18 |
immature T cell | 5.91e-10 | 18 |
mature T cell | 5.91e-10 | 18 |
immature alpha-beta T cell | 5.91e-10 | 18 |
nongranular leukocyte | 1.34e-09 | 115 |
leukocyte | 7.79e-09 | 136 |
lymphoid lineage restricted progenitor cell | 2.02e-08 | 52 |
T cell | 4.84e-08 | 25 |
pro-T cell | 4.84e-08 | 25 |
lymphocyte | 7.01e-08 | 53 |
common lymphoid progenitor | 7.01e-08 | 53 |
CD8-positive, alpha-beta T cell | 3.01e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 4.26e-07 | 120 |