FFCP PHASE1:Hg19::chr18:47018869..47018896,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100526842,6139 | |EntrezGene=100526842,6139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10307 | |HGNC=10307 | ||
|TSSclassifier=strong | |||
|UniProt=P18621 | |UniProt=P18621 | ||
|association_with_transcript=9bp_to_ENST00000418495,ENST00000441578,uc002ldp.2,uc002ldq.2,uc010xdg.1_5end | |association_with_transcript=9bp_to_ENST00000418495,ENST00000441578,uc002ldp.2,uc002ldq.2,uc010xdg.1_5end | ||
|cluster_id=chr18:47018869..47018896,- | |||
|coexpression_cluster_id=C1236 | |coexpression_cluster_id=C1236 | ||
|description=CAGE_peak_2_at_RPL17_5end | |description=CAGE_peak_2_at_RPL17_5end | ||
|id=chr18:47018869..47018896,- | |id=chr18:47018869..47018896,- | ||
|ontology_enrichment_celltype=CL:0000012!2.15e-27!682;CL:0000548!5.19e-27!679;CL:0000004!5.19e-27!679;CL:0000255!5.19e-27!679;CL:0000003!1.88e-19!722;CL:0002321!1.79e-18!248;CL:0000220!1.15e-17!246;CL:0000066!3.32e-17!254;CL:0000144!8.37e-16!625;CL:0002371!7.34e-10!591;CL:0000222!6.37e-09!119;CL:0000393!9.53e-09!60;CL:0000211!9.53e-09!60;CL:0000055!1.21e-08!180;CL:0000063!2.07e-08!578;CL:0000680!2.52e-08!57;CL:0000056!2.52e-08!57;CL:0000355!2.52e-08!57;CL:0000187!1.26e-07!54 | |ontology_enrichment_celltype=CL:0000012!2.15e-27!682;CL:0000548!5.19e-27!679;CL:0000004!5.19e-27!679;CL:0000255!5.19e-27!679;CL:0000003!1.88e-19!722;CL:0002321!1.79e-18!248;CL:0000220!1.15e-17!246;CL:0000066!3.32e-17!254;CL:0000144!8.37e-16!625;CL:0002371!7.34e-10!591;CL:0000222!6.37e-09!119;CL:0000393!9.53e-09!60;CL:0000211!9.53e-09!60;CL:0000055!1.21e-08!180;CL:0000063!2.07e-08!578;CL:0000680!2.52e-08!57;CL:0000056!2.52e-08!57;CL:0000355!2.52e-08!57;CL:0000187!1.26e-07!54 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.07e-18,250;CL:0000066,1.95e-17,253;CL:0000222,8.00e-09,121;CL:0000393,1.92e-08,61;CL:0000211,1.92e-08,61;CL:0000680,5.06e-08,58;CL:0000056,5.06e-08,58;CL:0000355,5.06e-08,58;CL:0000187,2.47e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.14e-17!239;DOID:162!2.36e-16!235;DOID:305!1.40e-08!106;DOID:0050687!1.40e-08!143;DOID:0050686!5.62e-08!137 | |ontology_enrichment_disease=DOID:14566!1.14e-17!239;DOID:162!2.36e-16!235;DOID:305!1.40e-08!106;DOID:0050687!1.40e-08!143;DOID:0050686!5.62e-08!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.13e-17,239;DOID:162,2.36e-16,235;DOID:305,1.40e-08,106;DOID:0050687,1.40e-08,143;DOID:0050686,5.61e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000486!6.24e-10!82;UBERON:0000914!4.34e-09!83;UBERON:0002329!4.34e-09!83;UBERON:0003077!4.34e-09!83;UBERON:0003059!4.34e-09!83;UBERON:0007282!4.34e-09!83;UBERON:0009618!4.34e-09!83;UBERON:0007285!4.34e-09!83;UBERON:0000490!1.23e-08!138;UBERON:0004290!1.49e-08!70;UBERON:0003104!6.56e-08!238;UBERON:0009142!6.56e-08!238;UBERON:0001134!3.93e-07!61;UBERON:0002036!3.93e-07!61;UBERON:0003082!3.93e-07!61 | |ontology_enrichment_uberon=UBERON:0000486!6.24e-10!82;UBERON:0000914!4.34e-09!83;UBERON:0002329!4.34e-09!83;UBERON:0003077!4.34e-09!83;UBERON:0003059!4.34e-09!83;UBERON:0007282!4.34e-09!83;UBERON:0009618!4.34e-09!83;UBERON:0007285!4.34e-09!83;UBERON:0000490!1.23e-08!138;UBERON:0004290!1.49e-08!70;UBERON:0003104!6.56e-08!238;UBERON:0009142!6.56e-08!238;UBERON:0001134!3.93e-07!61;UBERON:0002036!3.93e-07!61;UBERON:0003082!3.93e-07!61 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,8.60e-10,148;UBERON:0000486,1.17e-09,83;UBERON:0002329,2.79e-08,71;UBERON:0003059,2.79e-08,71;UBERON:0007282,2.79e-08,71;UBERON:0004290,2.79e-08,71;UBERON:0009618,2.79e-08,71;UBERON:0003077,6.30e-08,72;UBERON:0007285,6.30e-08,72;UBERON:0007524,1.05e-07,73;UBERON:0007503,2.68e-07,78;UBERON:0001134,7.08e-07,62;UBERON:0002036,7.08e-07,62;UBERON:0003082,7.08e-07,62 | |||
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| ||
|short_description=p2@RPL17 | |short_description=p2@RPL17 | ||
}} | }} |
Latest revision as of 17:35, 19 September 2015
Short description: | p2@RPL17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL17_5end |
Coexpression cluster: | C1236_acute_Mesenchymal_iPS_Skeletal_Bronchial_chronic_embryonic |
Association with transcript: | 9bp_to_ENST00000418495, ENST00000441578, uc002ldp.2, uc002ldq.2, uc010xdg.1_5end |
EntrezGene: | 100526842,6139 |
HGNC: | 10307 |
UniProt: | P18621 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.07e-18 | 250 |
epithelial cell | 1.95e-17 | 253 |
mesodermal cell | 8.00e-09 | 121 |
electrically responsive cell | 1.92e-08 | 61 |
electrically active cell | 1.92e-08 | 61 |
muscle precursor cell | 5.06e-08 | 58 |
myoblast | 5.06e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.06e-08 | 58 |
muscle cell | 2.47e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 8.60e-10 | 148 |
multilaminar epithelium | 1.17e-09 | 83 |
somite | 2.79e-08 | 71 |
presomitic mesoderm | 2.79e-08 | 71 |
presumptive segmental plate | 2.79e-08 | 71 |
dermomyotome | 2.79e-08 | 71 |
trunk paraxial mesoderm | 2.79e-08 | 71 |
paraxial mesoderm | 6.30e-08 | 72 |
presumptive paraxial mesoderm | 6.30e-08 | 72 |
dense mesenchyme tissue | 1.05e-07 | 73 |
epithelial vesicle | 2.68e-07 | 78 |
skeletal muscle tissue | 7.08e-07 | 62 |
striated muscle tissue | 7.08e-07 | 62 |
myotome | 7.08e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.13e-17 | 239 |
cancer | 2.36e-16 | 235 |
carcinoma | 1.40e-08 | 106 |
cell type cancer | 1.40e-08 | 143 |
organ system cancer | 5.61e-08 | 137 |