FFCP PHASE1:Hg19::chr3:8543561..8543579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6633 | |||
|TSSclassifier=strong | |||
|UniProt=B4DEY6,F8WB09 | |||
|association_with_transcript=0bp_to_ENST00000397386,ENST00000456506_5end | |||
|cluster_id=chr3:8543561..8543579,+ | |||
|coexpression_cluster_id=C2756 | |||
|description=CAGE_peak_3_at_LMCD1_5end | |||
|id=chr3:8543561..8543579,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.11e-09!180;CL:0000136!4.24e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.84e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.92e-09,15;CL:0000057,7.19e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.72e-12!365;UBERON:0002100!3.27e-10!216;UBERON:0003103!1.32e-09!69;UBERON:0009569!3.55e-08!113;UBERON:0000483!6.10e-08!309;UBERON:0000119!8.17e-08!312;UBERON:0000481!2.58e-07!347;UBERON:0007023!2.82e-07!115;UBERON:0005256!3.55e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.11e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,2.23e-09,68;UBERON:0002100,1.79e-08,199;UBERON:0003104,2.39e-07,160;UBERON:0009142,2.39e-07,160;UBERON:0009569,2.41e-07,112;UBERON:0001013,5.54e-07,14 | |||
|phase1_expression=8.3572054464456,9.63452357509424,9.3029906703341,6.00439790118782,7.15137751083661,9.59572376510406,5.06599756336621,3.79031924056099,1.56711376919903,2.21160542851358,7.6758128476967,3.9319446983431,6.59417445571134,0.618831764800233,0.994192127183747,0.672325146451775,0,0,0,4.30923703268758,3.26401105990805,11.9112794161673,3.72106783270374,4.37998160233229,5.02170558379211,2.67446920117829,2.38091709404843,4.09296062831132,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0.977766799900771,0,1.94826728407911,0.445641827540694,0.589211814949674,2.43687284041983,1.62482318259009,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,2.43806866313962,2.68280343881454,2.81297636055767,1.80719576192283,1.50401373190767,5.35932120155048,1.5905718941022,2.91980922181582,6.33383274999255,5.5432349365641,4.83091321312193,2.68507104770311,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0,0,0.39752481473341,1.72046919021225,1.04142150482278,0.56530794192401,1.25849830862972,1.37559020970034,1.25396979922086,0,0,0.33472061276467,0.402829317109147,0.760272105718513,3.1728067481262,0,1.62028389576352,0.982297011124877,0.898117490504679,0.788280363383256,0,0,1.28241220751285,0,0,0,6.95760732373446,2.91250176828533,2.51577443545116,3.72887606973458,2.4826786753885,2.80338800071154,3.20246987189115,1.97334038733728,2.17847724779836,1.34710672069688,1.9615428373615,1.05950199351452,1.72852777344,0.70296429550139,0,1.1409436430889,1.49448680551801,2.93586246609412,1.78060238804945,2.52811452064047,0.204154171254893,1.10550885580591,0.516628905878827,2.37600571456411,2.22540236350701,2.73048408581408,10.0606539854273,0.336672227908132,0.750711119231785,0,1.75591048352335,3.0648779579902,1.80285670687916,2.94923676216055,1.97328599257748,4.05759038755278,5.51022943014861,1.20036438433761,2.67936576019941,1.8034837803194,4.46680455195816,1.35021065793013,1.46155507741798,3.78650661366172,4.97069452668416,0.969876340912871,2.13005755509969,1.0075209822764,2.03472710772585,0,0.272746120590835,0.860413786167011,0.731842236777572,0.795178609928912,0.69716365721711,0.414644220061482,0.252320850875628,0.72995471815166,0,5.14592750554308,4.14404764057442,3.25057549622385,6.49691533502627,0,0,0,0,0,0,0,0,0,0,1.40241773803446,7.4083322039652,19.1111324801205,0,0,0,0,0.983907508344908,1.54411029268673,1.53650399572076,0,0.201057944823262,0.740707561268237,0,0,1.44331342025273,3.4779121492523,1.6437217193015,0.866198686566443,1.85194205030644,0.761016608938393,0,1.71697232418975,0,0,0,1.87467667973554,3.52762469217605,1.27597587518148,0.0895585227028483,0.290633938513962,1.53353071666084,0,0.088048434013226,0,0.144119953416961,0,2.28592419451809,1.90994212779139,1.17217447210047,1.71072446022705,2.05654985406647,2.10240140490742,2.28661146104463,0.448524337381443,0.87192013766656,0.7333828582095,4.78305348303778,14.3062578340753,6.762422020448,1.59562869950922,3.12022310734098,2.31486636835928,1.41849132023278,1.8649552531127,5.29018576535146,13.5655401347861,15.6415663988346,3.25736184293735,5.33087923113819,9.50342247520115,1.50719688529793,0.871533458600294,2.69927076191554,0,0,0,0.718874566474748,0,0,3.04040744001916,1.2328579353023,3.76028022803781,0,0,0,0.128343036279748,2.03275699377971,0,0,0.335032530668698,0,0,0,0,1.10422342547226,2.50085260529839,0.271265023699736,1.87173775377726,3.56857977594324,2.52323864054295,1.17141414992713,6.62081419400982,18.1926003244788,3.10419213877515,1.32845119707087,2.76553752812555,1.21637060255316,0.979005787313703,0.686286847621712,0,0,0,1.5156378572313,3.32870879020994,6.95497674658265,10.4205279283886,8.28694655755537,12.9103643439214,7.43207065683066,9.72243773226737,6.4341568457443,8.90508398669946,3.23840356985577,3.37367278094941,1.23190734020714,0,1.16210378459959,1.69203229428271,1.40354529212299,0.0920809889358963,0.229628896329213,0.182091168006717,1.18011973463482,3.15839729035188,2.00239876471478,6.27479815341484,5.84556898613043,3.9054102690364,0,0.680374821106063,1.72732732881711,0,4.87703587578935,8.52872615553251,3.05851527654046,1.66215201785745,7.38786690583188,0.219259876645935,0,1.02580050046556,1.31205858279882,0.325378394664303,2.26690225624989,1.64825036673018,2.0627374980147,0,0,4.82051789532479,0.386682873168488,1.69453478826109,3.07007349452259,3.44591431211326,6.1229539574916,5.51063436874068,2.13066568540252,3.47224939022276,0,0.192190067365106,0.638063562472921,0.2023155617111,2.78907329578371,1.88887408098384,0.6970372701606,0,0,0,0.18532421910392,0.858749320451947,0.744316738719335,4.11293252134344,5.52827562379092,2.55897791311334,3.85145089230528,1.27281299170375,0,3.77732160924961,4.11805544604082,4.59468369148177,0.202182481573316,1.58510321173008,1.26377536871694,3.41343617362713,1.21856744815642,1.05650146756755,1.09199929126389,1.1312434556297,0,1.10273068709225,1.32687795048244,2.19225442626881,4.05142873986681,1.31178950409327,0.811641507850816,0.6196469961995,4.22543403798362,3.29846110069318,4.22470876356421,0.35667105148125,0,4.85547561184627,7.90307743103764,0.75894634753143,0.349934720244983,0.192444225451024,0,1.08890984861323,1.97701981631236,0.43050537267123,0,0.443430153536676,0.918893600827838,0,0,0.569647187174163,0,0,0,0,0,2.56377770705936,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.540911356951966,2.33150377598474,4.22961015263549,0.748562161632879,9.669539831945,2.06312886974173,3.78907506543426,0,0,0.296964680832639,0,0.994147647766298,0.844016498463076,2.78271762557265,0,0.211125408127993,19.3270548603538,4.69682656402951,5.03865495708552,3.57940388757542,0.123084805461069,4.97663340258892,1.79736702294654,0.358042349351218,1.53471711068062,6.11589114948988,0,2.22273980289274,3.87733098438087,1.02044907978036,1.99613798001194,3.1251331330228,1.48681999993533,4.34999745260876,0.796554137998498,2.54253650292766,0,0.344743373241465,0,1.90987494426621,0,0.964771509003264,1.52581736317083,0.552896299656123,2.36438095162838,0.87754158861589,0,0.278847488557207,3.15496059865568,2.73460934032803,0,0.448788222048861,0.108647371922008,0.31900115973192,2.38153742844842,0.533034776018635,0,1.2558420511602,0.166211681900156,0,0,0,0,0,3.79796516150449,2.12202650606892,0.989471500037586,0,0.995261931078505,1.85760885457012,0.611030144933625,5.93042257361244,7.16670845889717,8.77144375845825,1.95463285643963,21.6695964770673,0.937057782901357,0,0.19566461893209,0,1.97292201424695,0,0,5.49723242767845,0.901940516486955,1.65901106235595,3.98792323624311,0.330991955875499,0.941798755221676,0,0,2.77349346026277,0.694238953340524,0,3.04707223031409,5.41652671550293,1.54787429224455,0,0,0,2.23074737923365,8.73735654245853,4.06765333404958,0.411125773940253,0.596143835108969,0.823040347426423,0.391102765469606,1.92381168603681,5.97668385270187,0.39961921916426,1.44090417154106,0.458146384663663,2.4023299700675,0,0.124252535565433,0,0,0.418411385249333,0.815985741090574,0,1.80126086612937,0.958337652243951,1.27746588066972,1.28929632425987,3.41753560563109,7.54062483435086,9.39557738447903,6.46085722119133,3.99358000997982,8.58452096273142,5.57928643604681,7.39018197353989,7.20599767084807,0,1.02418136999391,0.906574442192831,1.3480708770837,0.885847333632739,0,0,0.953423842781029,1.28602518772015,2.75078873194468,0.83088067605837,3.82455615637551,1.5476039091159,1.03274246318642,0,2.44297692627514,3.25218446436988,0.105600336519406,0.35857467866569,3.07064315711112,1.42939065274673,5.95882773328889,0.25426853765475,2.17199840701485,0,1.63293680054705,0,0.492555124496034,0.511164065356265,2.26624183040251,0.146552233678082,1.32506888912221,2.32709321450791,1.45455861916959,1.71086837884329,0.704815022316672,4.27149650270779,6.13096789888697,5.38510771951354,3.47316215268366,0.197611631897944,2.80122976276061,0,9.24830265728106,11.0303553369988,13.4792053775923,5.24596209135687,0.942324577501406,0,0.122026264901963,0.3755727921195,1.72022758707021,2.5513681853476,2.91853093824502,0,0.999843263696853,0.303298235083296,5.70930667089935,1.17632909849086,0,1.01444720027578,2.53733164907686,6.07654605602784,2.77402930751307,3.21985108967651,5.0313580350515,1.77962244319307,1.60188047877847,5.74677510300308,2.33155800874171,1.03498604992744,1.11507737014592,1.34940933649081,2.79473322377267,0.829412415681711,3.45594228925393,5.21745061811734,4.80824348791099,2.66563648518157,1.22061219961398,3.09142720644351,3.86678005352958,8.81664143769138,2.78667122089031,4.80033317595784,3.43395705182793,1.6837474438296,0,0.770479321629213,0.857766365499703,0,1.36023555307363,0.463044948647668,0,0,0,1.97355644620836,2.12026975135057,0,0,0.512483037175893,0,0.607719912354764,0.414775308455192,3.50748555910899,2.39156712564054,5.72478879895455,1.63804924423206,3.93236654005951,0.422624246717254,8.79944541761692,0,0,0,2.02516545277025,0,0,0.127894371303652,0.215649622793364,0.314531883711793,0.54604819096007,3.3946505990805,1.2754495206101,0,0,5.0880696104547,0,0,3.17408349321616,0,0.642292250964595,0,0.798169295285756,1.02558182120378,0,0.829887029570615,1.13032951942296,4.28308260777463,0.196295437002051,0,0,0.115525666150338,3.81382095467167,0,0,4.88867134270172,7.86649767943728,4.68908406739856,0,1.14640342257068,0.739280431085226,1.2156765231311,0,0.620060389503552,0.697573912132975,0,6.57909320228619,6.94695649745012,1.05522746615772,0.894336993477167,4.82131652290458,7.73452561103295,1.82089681270989,0.682986574053893,2.92717821536708,5.18552944001007,7.03100838693416,1.01954599465248,0.657727735628491,1.65471377237555,0.889851215136553,3.13972371402056,0.471346769748006,0,0.913158720509496,3.23891386827932,0.9555033757741,2.43020250200632,2.68623139945635,0,0.173858272302579,1.60342272946051,0.414432328326074,0.51215543128185,0,7.31386509994472,0,0,1.69354820076372,0.68732060563215,0,2.8666168169323,0.223710863595585,3.4352581765335,0,23.9548669759521,16.7340375175683,16.2374020387348,5.82853191670967,5.38060765962843,1.98950775161368,0.83244063544298,0.11294608203896,1.97892930141772,4.98177383770023,0.771741581079447,0.874238242015829,7.05475944542284,9.31563622664841,0.707029641304878,1.37415926980462,2.67341760294377,1.6906229103336,3.0586880643807,2.44358186747619,2.96506284678455,0,0,0.705789743431384,1.60482733378337,0.730336388246517,4.58729283404541,1.00337708206016,1.57771562193185,0.951880862672806,0,4.2322147241232,1.48798007266701,2.31087814315709,8.65253124247578,1.51399709802095,0.655593431782173,5.70143254551466,0.61193297845189,0.801652215796681,0.459474497674225,0,5.45606627171324,5.09131847296739,0.829169439458779,0.620597975171371,15.3528466968706,6.18967521805725,0.645889098360061,0.869046000142011,5.0459338161276,0.891060215894309,1.81905470062397,9.36182015956934,9.24029912930259,2.76143417359809,2.86888821570705,3.32660356546013,1.38385556638657,0.747091421144008,0,0,9.38563769613817,3.30051899293739,2.44137706989443,3.99454064511308,2.01273793591026,2.8851164307291 | |||
|short_description=p3@LMCD1 | |||
}} |
Latest revision as of 17:49, 19 September 2015
Short description: | p3@LMCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LMCD1_5end |
Coexpression cluster: | C2756_skeletal_Adipocyte_mature_Preadipocyte_Hepatic_Mesenchymal_aorta |
Association with transcript: | 0bp_to_ENST00000397386, ENST00000456506_5end |
EntrezGene: | LMCD1 |
HGNC: | 6633 |
UniProt: | B4DEY6F8WB09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.92e-09 | 15 |
fibroblast | 7.19e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
compound organ | 2.23e-09 | 68 |
trunk | 1.79e-08 | 199 |
mesenchyme | 2.39e-07 | 160 |
entire embryonic mesenchyme | 2.39e-07 | 160 |
subdivision of trunk | 2.41e-07 | 112 |
adipose tissue | 5.54e-07 | 14 |