FFCP PHASE1:Hg19::chr6:109775947..109775958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64780 | |EntrezGene=64780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20619 | |HGNC=20619 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-294bp_to_uc003ptj.2_5end | |||
|cluster_id=chr6:109775947..109775958,- | |||
|description=CAGE_peak_14_at_MICAL1_5end | |||
|id=chr6:109775947..109775958,- | |||
|ontology_enrichment_celltype=CL:0000738!1.94e-43!140;CL:0000037!1.08e-38!172;CL:0000566!1.08e-38!172;CL:0002087!2.99e-37!119;CL:0002032!8.07e-36!165;CL:0000837!8.07e-36!165;CL:0000988!1.03e-35!182;CL:0002031!3.42e-35!124;CL:0002009!2.00e-20!65;CL:0000763!1.29e-18!112;CL:0000049!1.29e-18!112;CL:0000557!4.30e-18!71;CL:0000766!8.24e-18!76;CL:0002194!1.24e-17!63;CL:0000576!1.24e-17!63;CL:0000040!1.24e-17!63;CL:0000559!1.24e-17!63;CL:0000838!4.75e-17!52;CL:0000542!1.29e-16!53;CL:0000051!1.29e-16!53;CL:0000990!1.33e-16!8;CL:0000839!3.20e-15!70;CL:0000840!3.57e-15!5;CL:0001029!3.57e-15!5;CL:0002057!1.39e-14!42;CL:0000219!3.35e-14!390;CL:0000451!2.62e-13!10;CL:0000860!2.69e-13!45;CL:0000148!5.29e-13!10;CL:0000541!5.29e-13!10;CL:0002393!1.85e-12!9;CL:0002397!1.85e-12!9;CL:0000134!2.31e-11!358;CL:0002320!7.32e-11!365;CL:0000624!1.51e-10!6;CL:0002567!2.50e-09!3;CL:0000147!6.49e-09!14;CL:0000945!2.91e-08!24;CL:0000826!2.91e-08!24;CL:0000236!3.76e-08!14;CL:0000453!3.77e-08!5;CL:0000623!4.50e-08!3;CL:0000825!4.50e-08!3;CL:0000898!5.89e-08!3;CL:0000875!8.25e-08!3;CL:0002396!8.25e-08!3;CL:0000791!1.09e-07!18;CL:0000789!1.09e-07!18;CL:0002420!1.09e-07!18;CL:0002419!1.09e-07!18;CL:0000790!1.09e-07!18;CL:0000723!3.12e-07!436;CL:0000048!4.67e-07!430;CL:0000034!7.56e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.68e-36;10!CL:0002567;3.61e-31;3!CL:0000147;7.52e-26;14!CL:0000710;5.38e-18;20!CL:0000226;4.72e-14;3!CL:0000842;4.72e-14;3!CL:0000075;3.14e-13;27!CL:0002566;1.78e-11;1!CL:0002077;7.32e-10;34!CL:0000236;1.47e-07;13!CL:0000624;1.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.94e-36,10;CL:0000541,2.94e-36,10;CL:0002567,3.62e-31,3;CL:0000147,8.04e-26,14;CL:0000710,5.64e-18,20;CL:0000226,4.42e-14,3;CL:0000842,4.42e-14,3;CL:0000075,3.24e-13,27;CL:0002566,1.78e-11,1;CL:0002077,2.08e-10,34;CL:0000738,3.72e-10,136;CL:0002087,1.15e-08,115;CL:0000333,3.90e-08,41;CL:0000037,7.59e-08,168;CL:0000624,2.33e-07,6;CL:0000988,2.41e-07,177;CL:0000236,4.25e-07,14;CL:0002031,9.57e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.59e-16!102;UBERON:0003061!4.59e-16!102;UBERON:0002371!2.93e-15!80;UBERON:0002193!6.90e-14!112;UBERON:0001474!1.05e-13!86;UBERON:0002405!4.08e-11!115;UBERON:0004765!1.17e-10!101;UBERON:0001434!1.17e-10!101;UBERON:0002384!3.51e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p14@MICAL1 | |||
}} | }} |
Latest revision as of 18:43, 19 September 2015
Short description: | p14@MICAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MICAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -294bp_to_uc003ptj.2_5end |
EntrezGene: | MICAL1 |
HGNC: | 20619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.94e-36 | 10 |
melanoblast | 2.94e-36 | 10 |
light melanocyte | 3.62e-31 | 3 |
pigment cell | 8.04e-26 | 14 |
neurecto-epithelial cell | 5.64e-18 | 20 |
single nucleate cell | 4.42e-14 | 3 |
mononuclear cell | 4.42e-14 | 3 |
columnar/cuboidal epithelial cell | 3.24e-13 | 27 |
dark melanocyte | 1.78e-11 | 1 |
ecto-epithelial cell | 2.08e-10 | 34 |
leukocyte | 3.72e-10 | 136 |
nongranular leukocyte | 1.15e-08 | 115 |
migratory neural crest cell | 3.90e-08 | 41 |
hematopoietic stem cell | 7.59e-08 | 168 |
CD4-positive, alpha-beta T cell | 2.33e-07 | 6 |
hematopoietic cell | 2.41e-07 | 177 |
B cell | 4.25e-07 | 14 |
hematopoietic lineage restricted progenitor cell | 9.57e-07 | 120 |