FFCP PHASE1:Hg19::chr19:54372779..54372792,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=0bp_to_NM_001020818,uc002qcp.2_5end | |association_with_transcript=0bp_to_NM_001020818,uc002qcp.2_5end | ||
|cluster_id=chr19:54372779..54372792,+ | |||
|description=CAGE_peak_14_at_MYADM_5end | |description=CAGE_peak_14_at_MYADM_5end | ||
|id=chr19:54372779..54372792,+ | |id=chr19:54372779..54372792,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.58e-13!180;CL:0000012!4.37e-10!682;CL:0000548!4.52e-10!679;CL:0000004!4.52e-10!679;CL:0000255!4.52e-10!679;CL:0000222!1.04e-08!119;CL:0000144!2.05e-08!625;CL:0000057!6.72e-08!75;CL:0000192!9.53e-07!42;CL:0000514!9.53e-07!42 | |ontology_enrichment_celltype=CL:0000055!2.58e-13!180;CL:0000012!4.37e-10!682;CL:0000548!4.52e-10!679;CL:0000004!4.52e-10!679;CL:0000255!4.52e-10!679;CL:0000222!1.04e-08!119;CL:0000144!2.05e-08!625;CL:0000057!6.72e-08!75;CL:0000192!9.53e-07!42;CL:0000514!9.53e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.14e-07,32;CL:0000222,7.18e-07,121;CL:0000057,7.74e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.71e-12!118;UBERON:0004872!2.30e-08!84;UBERON:0001637!3.19e-08!42;UBERON:0003509!3.19e-08!42;UBERON:0004572!3.19e-08!42;UBERON:0001981!4.26e-08!60;UBERON:0007500!4.26e-08!60;UBERON:0004537!4.26e-08!60;UBERON:0006965!4.26e-08!60;UBERON:0005256!5.16e-08!143;UBERON:0002049!2.30e-07!79;UBERON:0007798!2.30e-07!79;UBERON:0004573!6.89e-07!33;UBERON:0004571!6.89e-07!33;UBERON:0002100!9.04e-07!216 | |ontology_enrichment_uberon=UBERON:0003914!6.71e-12!118;UBERON:0004872!2.30e-08!84;UBERON:0001637!3.19e-08!42;UBERON:0003509!3.19e-08!42;UBERON:0004572!3.19e-08!42;UBERON:0001981!4.26e-08!60;UBERON:0007500!4.26e-08!60;UBERON:0004537!4.26e-08!60;UBERON:0006965!4.26e-08!60;UBERON:0005256!5.16e-08!143;UBERON:0002049!2.30e-07!79;UBERON:0007798!2.30e-07!79;UBERON:0004573!6.89e-07!33;UBERON:0004571!6.89e-07!33;UBERON:0002100!9.04e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.77e-07;42!UBERON:0003509;3.77e-07;42!UBERON:0004572;3.77e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.19e-12,117;UBERON:0004872,2.93e-09,83;UBERON:0007500,1.09e-08,59;UBERON:0001981,1.09e-08,59;UBERON:0004537,1.09e-08,59;UBERON:0006965,1.09e-08,59;UBERON:0001637,2.05e-08,42;UBERON:0003509,2.05e-08,42;UBERON:0004572,2.05e-08,42;UBERON:0000055,5.56e-07,68 | |||
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| ||
|short_description=p14@MYADM | |short_description=p14@MYADM | ||
}} | }} |
Latest revision as of 20:03, 19 September 2015
Short description: | p14@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MYADM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001020818, uc002qcp.2_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.14e-07 | 32 |
mesodermal cell | 7.18e-07 | 121 |
fibroblast | 7.74e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.19e-12 | 117 |
splanchnic layer of lateral plate mesoderm | 2.93e-09 | 83 |
epithelial tube open at both ends | 1.09e-08 | 59 |
blood vessel | 1.09e-08 | 59 |
blood vasculature | 1.09e-08 | 59 |
vascular cord | 1.09e-08 | 59 |
artery | 2.05e-08 | 42 |
arterial blood vessel | 2.05e-08 | 42 |
arterial system | 2.05e-08 | 42 |
vessel | 5.56e-07 | 68 |