FFCP PHASE1:Hg19::chr1:202431859..202431868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4660 | |EntrezGene=4660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7619 | |HGNC=7619 | ||
|TSSclassifier=strong | |||
|UniProt=O60237 | |UniProt=O60237 | ||
|association_with_transcript=-2bp_to_ENST00000290419,ENST00000367270,ENST00000391959,ENST00000491336,NM_032103,NM_032104,uc001gyb.1,uc001gyc.1_5end | |association_with_transcript=-2bp_to_ENST00000290419,ENST00000367270,ENST00000391959,ENST00000491336,NM_032103,NM_032104,uc001gyb.1,uc001gyc.1_5end | ||
|cluster_id=chr1:202431859..202431868,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_20_at_PPP1R12B_5end | |description=CAGE_peak_20_at_PPP1R12B_5end | ||
|id=chr1:202431859..202431868,+ | |id=chr1:202431859..202431868,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.42e-50;1 | |||
|ontology_enrichment_disease=DOID:114!4.89e-41!2;DOID:178!2.30e-21!1;DOID:326!2.30e-21!1;DOID:3978!2.30e-21!1;DOID:3394!2.30e-21!1;DOID:5844!2.30e-21!1;DOID:1287!4.23e-21!4 | |ontology_enrichment_disease=DOID:114!4.89e-41!2;DOID:178!2.30e-21!1;DOID:326!2.30e-21!1;DOID:3978!2.30e-21!1;DOID:3394!2.30e-21!1;DOID:5844!2.30e-21!1;DOID:1287!4.23e-21!4 | ||
|ontology_enrichment_disease_v019=DOID:114;9.38e-99;2!DOID:178;3.99e-50;1!DOID:326;3.99e-50;1!DOID:3978;3.99e-50;1!DOID:3394;3.99e-50;1!DOID:5844;3.99e-50;1!DOID:1287;4.00e-50;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.38e-99,2;DOID:178,3.99e-50,1;DOID:326,3.99e-50,1;DOID:3978,3.99e-50,1;DOID:3394,3.99e-50,1;DOID:5844,3.99e-50,1;DOID:1287,4.00e-50,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!9.29e-36!27;UBERON:0003978!4.07e-27!3;UBERON:0009751!4.07e-27!3;UBERON:0000946!4.07e-27!3;UBERON:0002523!4.07e-27!3;UBERON:0005983!4.07e-27!3;UBERON:0002165!4.07e-27!3;UBERON:0002062!4.07e-27!3;UBERON:0007280!4.07e-27!3;UBERON:0002084!1.88e-21!1;UBERON:0002082!1.88e-21!1;UBERON:0004706!1.88e-21!1;UBERON:0007029!2.82e-21!1;UBERON:0002146!5.16e-21!1;UBERON:0005623!5.16e-21!1;UBERON:0002135!6.31e-21!1;UBERON:0003103!6.35e-14!69;UBERON:0000948!1.35e-13!24;UBERON:0005498!1.35e-13!24;UBERON:0004140!1.35e-13!24;UBERON:0009881!1.35e-13!24;UBERON:0004141!1.35e-13!24;UBERON:0003084!1.35e-13!24;UBERON:0007005!1.35e-13!24;UBERON:0004139!1.35e-13!24;UBERON:0004291!1.35e-13!24;UBERON:0002133!3.70e-11!2;UBERON:0001009!2.13e-08!113;UBERON:0004151!4.84e-08!3;UBERON:0002300!4.84e-08!3 | |ontology_enrichment_uberon=UBERON:0007100!9.29e-36!27;UBERON:0003978!4.07e-27!3;UBERON:0009751!4.07e-27!3;UBERON:0000946!4.07e-27!3;UBERON:0002523!4.07e-27!3;UBERON:0005983!4.07e-27!3;UBERON:0002165!4.07e-27!3;UBERON:0002062!4.07e-27!3;UBERON:0007280!4.07e-27!3;UBERON:0002084!1.88e-21!1;UBERON:0002082!1.88e-21!1;UBERON:0004706!1.88e-21!1;UBERON:0007029!2.82e-21!1;UBERON:0002146!5.16e-21!1;UBERON:0005623!5.16e-21!1;UBERON:0002135!6.31e-21!1;UBERON:0003103!6.35e-14!69;UBERON:0000948!1.35e-13!24;UBERON:0005498!1.35e-13!24;UBERON:0004140!1.35e-13!24;UBERON:0009881!1.35e-13!24;UBERON:0004141!1.35e-13!24;UBERON:0003084!1.35e-13!24;UBERON:0007005!1.35e-13!24;UBERON:0004139!1.35e-13!24;UBERON:0004291!1.35e-13!24;UBERON:0002133!3.70e-11!2;UBERON:0001009!2.13e-08!113;UBERON:0004151!4.84e-08!3;UBERON:0002300!4.84e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.42e-50;1!UBERON:0002082;2.42e-50;1!UBERON:0007029;6.58e-50;1!UBERON:0007100;1.02e-18;25!UBERON:0004151;8.00e-18;3!UBERON:0000014;1.29e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.42e-50,1;UBERON:0002082,2.42e-50,1;UBERON:0010226,2.42e-50,1;UBERON:0007029,6.58e-50,1;UBERON:0004151,8.00e-18,3;UBERON:0007100,2.09e-17,27;UBERON:0000014,1.29e-13,4;UBERON:0003103,1.88e-07,68 | |||
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|short_description=p20@PPP1R12B | |short_description=p20@PPP1R12B | ||
}} | }} |
Latest revision as of 20:31, 19 September 2015
Short description: | p20@PPP1R12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PPP1R12B_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -2bp_to_ENST00000290419, ENST00000367270, ENST00000391959, ENST00000491336, NM_032103, NM_032104, uc001gyb.1, uc001gyc.1_5end |
EntrezGene: | PPP1R12B |
HGNC: | 7619 |
UniProt: | O60237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.42e-50 | 1 |
cardiac ventricle | 2.42e-50 | 1 |
future cardiac ventricle | 2.42e-50 | 1 |
surface | 6.58e-50 | 1 |
cardiac chamber | 8.00e-18 | 3 |
primary circulatory organ | 2.09e-17 | 27 |
zone of skin | 1.29e-13 | 4 |
compound organ | 1.88e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.38e-99 | 2 |
vascular disease | 3.99e-50 | 1 |
ischemia | 3.99e-50 | 1 |
extrinsic cardiomyopathy | 3.99e-50 | 1 |
myocardial ischemia | 3.99e-50 | 1 |
myocardial infarction | 3.99e-50 | 1 |
cardiovascular system disease | 4.00e-50 | 4 |