FFCP PHASE1:Hg19::chr12:65563797..65563808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23592 | |EntrezGene=23592 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28887 | |HGNC=28887 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=434bp_to_ENST00000541171_5end | |association_with_transcript=434bp_to_ENST00000541171_5end | ||
|cluster_id=chr12:65563797..65563808,+ | |||
|description=CAGE_peak_10_at_LEMD3_5end | |description=CAGE_peak_10_at_LEMD3_5end | ||
|id=chr12:65563797..65563808,+ | |id=chr12:65563797..65563808,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;5.12e-50;1!CL:0000097;2.80e-11;5!CL:0000138;1.27e-09;6!CL:0002570;1.75e-07;8!CL:0000153;7.69e-07;9!CL:0000447;7.69e-07;9!CL:0000163;7.69e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.99e-50,1;CL:0000097,2.66e-11,5;CL:0002028,2.66e-11,5;CL:0000058,1.32e-09,6;CL:0000138,1.32e-09,6;CL:0002570,1.80e-07,8;CL:0000163,7.48e-07,9;CL:0000153,7.91e-07,9;CL:0000447,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.88e-50;1!DOID:4549;1.88e-50;1!DOID:5861;1.88e-50;1!DOID:6496;1.88e-50;1!DOID:201;1.27e-09;6!DOID:0060100;1.27e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.42e-50,1;DOID:4549,2.42e-50,1;DOID:5861,2.42e-50,1;DOID:6496,2.42e-50,1;DOID:201,1.32e-09,6;DOID:0060100,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001871!3.24e-07!7 | |ontology_enrichment_uberon=UBERON:0001871!3.24e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;8.10e-26;2!UBERON:0002418;7.35e-18;3!UBERON:0004755;7.35e-18;3!UBERON:0001013;3.93e-15;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,7.14e-26,2;UBERON:0002418,8.00e-18,3;UBERON:0004755,8.00e-18,3;UBERON:0001013,3.93e-15,14 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,2.95597942737566,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11814704059601,0,0,0,0.126621591911757,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,1.10961172300523,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,2.95597942737566,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11814704059601,0,0,0,0.126621591911757,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,1.10961172300523,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@LEMD3 | |short_description=p10@LEMD3 | ||
}} | }} |
Latest revision as of 22:14, 19 September 2015
Short description: | p10@LEMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LEMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 434bp_to_ENST00000541171_5end |
EntrezGene: | LEMD3 |
HGNC: | 28887 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.99e-50 | 1 |
mast cell | 2.66e-11 | 5 |
basophil mast progenitor cell | 2.66e-11 | 5 |
chondroblast | 1.32e-09 | 6 |
chondrocyte | 1.32e-09 | 6 |
mesenchymal stem cell of adipose | 1.80e-07 | 8 |
endocrine cell | 7.48e-07 | 9 |
GAG secreting cell | 7.91e-07 | 9 |
carbohydrate secreting cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 7.14e-26 | 2 |
cartilage tissue | 8.00e-18 | 3 |
skeletal tissue | 8.00e-18 | 3 |
adipose tissue | 3.93e-15 | 14 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.42e-50 | 1 |
extraosseous chondrosarcoma | 2.42e-50 | 1 |
myxoid chondrosarcoma | 2.42e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 2.42e-50 | 1 |
connective tissue cancer | 1.32e-09 | 6 |
musculoskeletal system cancer | 1.32e-09 | 6 |