FFCP PHASE1:Hg19::chr15:92484543..92484569,+: Difference between revisions
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|id=chr15:92484543..92484569,+
|short_description=p6@SLCO3A1
|description=CAGE_peak_6_at_SLCO3A1_5end
|association_with_transcript=0bp_to_ENST00000556649_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28232 | |EntrezGene=28232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10952 | |HGNC=10952 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4E8 | |UniProt=G3V4E8 | ||
|association_with_transcript=0bp_to_ENST00000556649_5end | |||
|cluster_id=chr15:92484543..92484569,+ | |||
|description=CAGE_peak_6_at_SLCO3A1_5end | |||
|id=chr15:92484543..92484569,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.95e-18!254;CL:0000039!2.59e-14!7;CL:0000586!2.59e-14!7;CL:0002076!1.18e-13!43;CL:0000223!9.97e-10!59;CL:0002621!8.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002149;6.64e-10;6!CL:0002255;6.64e-10;6!CL:0000039;9.33e-09;7!CL:0000586;9.33e-09;7!CL:1000415;4.85e-08;2!CL:0000575;7.78e-08;2!CL:0002535;7.78e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.50e-10,6;CL:0002255,6.50e-10,6;CL:0000039,9.33e-09,7;CL:0000586,9.33e-09,7;CL:1000415,5.37e-08,2;CL:0000575,7.03e-08,2;CL:0002535,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.31e-14;1 | |||
|ontology_enrichment_disease=DOID:305!8.49e-24!106;DOID:0050687!6.06e-18!143;DOID:1749!7.83e-09!14;DOID:162!6.19e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.78e-15;14!DOID:178;8.74e-15;1!DOID:326;8.74e-15;1!DOID:3978;8.74e-15;1!DOID:3394;8.74e-15;1!DOID:5844;8.74e-15;1!DOID:3001;6.64e-10;6!DOID:114;4.85e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.78e-15,14;DOID:178,9.36e-15,1;DOID:326,9.36e-15,1;DOID:3978,9.36e-15,1;DOID:3394,9.36e-15,1;DOID:5844,9.36e-15,1;DOID:0050687,5.47e-12,143;DOID:305,2.46e-11,106;DOID:3001,6.50e-10,6;DOID:114,5.02e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.85e-22!72;UBERON:0000065!3.38e-19!53;UBERON:0001737!1.54e-18!9;UBERON:0004119!8.97e-17!169;UBERON:0000925!8.97e-17!169;UBERON:0006595!8.97e-17!169;UBERON:0001557!8.01e-16!19;UBERON:0001007!1.61e-15!155;UBERON:0001555!1.61e-15!155;UBERON:0007026!1.61e-15!155;UBERON:0008947!3.23e-15!38;UBERON:0003258!3.23e-15!38;UBERON:0000077!1.70e-14!130;UBERON:0004921!2.18e-13!129;UBERON:0004185!2.18e-13!129;UBERON:0000072!8.35e-13!46;UBERON:0001041!7.87e-11!98;UBERON:0000161!1.39e-10!35;UBERON:0002294!5.67e-08!7;UBERON:0001173!5.67e-08!7;UBERON:0004912!5.67e-08!7;UBERON:0000166!1.39e-07!21;UBERON:0005153!1.56e-07!37;UBERON:0005157!1.85e-07!51;UBERON:0001048!3.89e-07!168;UBERON:0001949!8.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;8.74e-15;1!UBERON:0005056;8.74e-15;1!UBERON:0004176;8.74e-15;1!UBERON:0002294;1.65e-08;7!UBERON:0001173;1.65e-08;7!UBERON:0006955;7.78e-08;2!UBERON:0004801;7.78e-08;2!UBERON:0000995;1.28e-07;17!UBERON:0003975;3.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,8.17e-15,1;UBERON:0005056,8.17e-15,1;UBERON:0006955,9.19e-08,2;UBERON:0004801,9.19e-08,2;UBERON:0002294,9.10e-07,9;UBERON:0001173,9.10e-07,9;UBERON:0004912,9.10e-07,9 | |||
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| ||
|short_description=p6@SLCO3A1 | |||
}} | }} |
Latest revision as of 22:29, 19 September 2015
Short description: | p6@SLCO3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLCO3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000556649_5end |
EntrezGene: | SLCO3A1 |
HGNC: | 10952 |
UniProt: | G3V4E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.50e-10 | 6 |
stromal cell of endometrium | 6.50e-10 | 6 |
germ line cell | 9.33e-09 | 7 |
germ cell | 9.33e-09 | 7 |
epithelial cell of gall bladder | 5.37e-08 | 2 |
corneal epithelial cell | 7.03e-08 | 2 |
epithelial cell of cervix | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 8.17e-15 | 1 |
external female genitalia | 8.17e-15 | 1 |
uterine epithelium | 9.19e-08 | 2 |
cervix epithelium | 9.19e-08 | 2 |
biliary system | 9.10e-07 | 9 |
biliary tree | 9.10e-07 | 9 |
biliary bud | 9.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.78e-15 | 14 |
vascular disease | 9.36e-15 | 1 |
ischemia | 9.36e-15 | 1 |
extrinsic cardiomyopathy | 9.36e-15 | 1 |
myocardial ischemia | 9.36e-15 | 1 |
myocardial infarction | 9.36e-15 | 1 |
cell type cancer | 5.47e-12 | 143 |
carcinoma | 2.46e-11 | 106 |
female reproductive endometrioid cancer | 6.50e-10 | 6 |
heart disease | 5.02e-08 | 2 |