FFCP PHASE1:Hg19::chr1:203596217..203596249,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:203596217..203596249,+ to FFCP PHASE1:Hg19::chr1:203596217..203596249,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=493 | |EntrezGene=493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=817 | |HGNC=817 | ||
|TSSclassifier=strong | |||
|UniProt=P23634 | |UniProt=P23634 | ||
|association_with_transcript=289bp_to_ENST00000367218,ENST00000367219,ENST00000391954,uc001gzv.2,uc001gzw.2_5end | |||
|cluster_id=chr1:203596217..203596249,+ | |||
|coexpression_cluster_id=C3923 | |||
|description=CAGE_peak_3_at_ATP2B4_5end | |||
|id=chr1:203596217..203596249,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.54e-15!180;CL:0000222!9.38e-14!119;CL:0000680!8.37e-12!57;CL:0000056!8.37e-12!57;CL:0000355!8.37e-12!57;CL:0000187!3.49e-11!54;CL:0000192!2.86e-10!42;CL:0000514!2.86e-10!42;CL:0000183!5.69e-10!59;CL:0000359!1.04e-09!32;CL:0000393!1.30e-09!60;CL:0000211!1.30e-09!60;CL:0000057!1.04e-08!75;CL:0002620!4.59e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.11e-09;32!CL:0000192;4.72e-08;43!CL:0002620;6.24e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.10e-13,121;CL:0000680,7.26e-12,58;CL:0000056,7.26e-12,58;CL:0000355,7.26e-12,58;CL:0000187,3.08e-11,55;CL:0000192,2.71e-10,43;CL:0000514,2.71e-10,43;CL:0000359,8.40e-10,32;CL:0000393,1.27e-09,61;CL:0000211,1.27e-09,61;CL:0000057,5.00e-09,76;CL:0002620,5.92e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;4.72e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.94e-19!84;UBERON:0001981!5.99e-17!60;UBERON:0007500!5.99e-17!60;UBERON:0004537!5.99e-17!60;UBERON:0006965!5.99e-17!60;UBERON:0002049!1.02e-15!79;UBERON:0007798!1.02e-15!79;UBERON:0000055!2.34e-15!69;UBERON:0000914!1.04e-13!83;UBERON:0002329!1.04e-13!83;UBERON:0003077!1.04e-13!83;UBERON:0003059!1.04e-13!83;UBERON:0007282!1.04e-13!83;UBERON:0009618!1.04e-13!83;UBERON:0007285!1.04e-13!83;UBERON:0001637!2.26e-13!42;UBERON:0003509!2.26e-13!42;UBERON:0004572!2.26e-13!42;UBERON:0001009!1.29e-12!113;UBERON:0002385!2.63e-12!63;UBERON:0001015!2.63e-12!63;UBERON:0000383!2.63e-12!63;UBERON:0004290!4.29e-12!70;UBERON:0001134!9.31e-12!61;UBERON:0002036!9.31e-12!61;UBERON:0003082!9.31e-12!61;UBERON:0004535!1.13e-11!110;UBERON:0003914!1.29e-11!118;UBERON:0004573!2.11e-11!33;UBERON:0004571!2.11e-11!33;UBERON:0000486!1.05e-10!82;UBERON:0000475!2.99e-09!365;UBERON:0000483!4.50e-09!309;UBERON:0000025!4.55e-09!194;UBERON:0000468!6.77e-09!659;UBERON:0000119!6.87e-09!312;UBERON:0000947!7.13e-09!21;UBERON:0010191!7.13e-09!21;UBERON:0005256!1.47e-08!143;UBERON:0004111!3.36e-08!241;UBERON:0000477!3.74e-08!286;UBERON:0000467!1.26e-07!625;UBERON:0000480!1.68e-07!626;UBERON:0000490!1.82e-07!138;UBERON:0007100!4.75e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.23e-10;33!UBERON:0004571;1.23e-10;33!UBERON:0001637;2.23e-10;42!UBERON:0003509;2.23e-10;42!UBERON:0004572;2.23e-10;42!UBERON:0007500;3.83e-09;56!UBERON:0001981;3.83e-09;56!UBERON:0004537;3.83e-09;56!UBERON:0000947;4.83e-09;21!UBERON:0010191;4.83e-09;21!UBERON:0000055;4.21e-07;65!UBERON:0007100;6.78e-07;25!UBERON:0002049;8.21e-07;75!UBERON:0007798;8.21e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.93e-19,83;UBERON:0007500,1.28e-16,59;UBERON:0001981,1.28e-16,59;UBERON:0004537,1.28e-16,59;UBERON:0006965,1.28e-16,59;UBERON:0002049,2.77e-15,78;UBERON:0007798,2.77e-15,78;UBERON:0000055,6.63e-15,68;UBERON:0001637,1.65e-13,42;UBERON:0003509,1.65e-13,42;UBERON:0004572,1.65e-13,42;UBERON:0001009,1.17e-12,112;UBERON:0007524,1.62e-12,73;UBERON:0002385,2.21e-12,64;UBERON:0001015,2.21e-12,64;UBERON:0000383,2.21e-12,64;UBERON:0007503,2.44e-12,78;UBERON:0003077,2.64e-12,72;UBERON:0007285,2.64e-12,72;UBERON:0003914,3.14e-12,117;UBERON:0002329,3.52e-12,71;UBERON:0003059,3.52e-12,71;UBERON:0007282,3.52e-12,71;UBERON:0004290,3.52e-12,71;UBERON:0009618,3.52e-12,71;UBERON:0001134,7.92e-12,62;UBERON:0002036,7.92e-12,62;UBERON:0003082,7.92e-12,62;UBERON:0004535,1.05e-11,109;UBERON:0004573,1.62e-11,33;UBERON:0004571,1.62e-11,33;UBERON:0000486,1.08e-10,83;UBERON:0000025,3.54e-09,192;UBERON:0005256,4.62e-09,122;UBERON:0000947,5.86e-09,21;UBERON:0010191,5.86e-09,21;UBERON:0000483,1.19e-08,306;UBERON:0003104,1.46e-08,160;UBERON:0009142,1.46e-08,160;UBERON:0000119,1.81e-08,309;UBERON:0000490,2.34e-08,148;UBERON:0004111,2.87e-08,240;UBERON:0007100,4.10e-07,27 | |||
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| ||
|short_description=p3@ATP2B4 | |||
}} | }} |
Latest revision as of 23:35, 19 September 2015
Short description: | p3@ATP2B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP2B4_5end |
Coexpression cluster: | C3923_mesenchymal_Mesothelial_Fibroblast_leiomyoma_basal_mature_epithelioid |
Association with transcript: | 289bp_to_ENST00000367218, ENST00000367219, ENST00000391954, uc001gzv.2, uc001gzw.2_5end |
EntrezGene: | ATP2B4 |
HGNC: | 817 |
UniProt: | P23634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.10e-13 | 121 |
muscle precursor cell | 7.26e-12 | 58 |
myoblast | 7.26e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.26e-12 | 58 |
muscle cell | 3.08e-11 | 55 |
smooth muscle cell | 2.71e-10 | 43 |
smooth muscle myoblast | 2.71e-10 | 43 |
vascular associated smooth muscle cell | 8.40e-10 | 32 |
electrically responsive cell | 1.27e-09 | 61 |
electrically active cell | 1.27e-09 | 61 |
fibroblast | 5.00e-09 | 76 |
skin fibroblast | 5.92e-07 | 23 |