FFCP PHASE1:Hg19::chrX:152770151..152770173,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQD6 | |UniProt=B4DQD6 | ||
|association_with_transcript=6bp_to_AK298756_5end | |association_with_transcript=6bp_to_AK298756_5end | ||
|cluster_id=chrX:152770151..152770173,+ | |||
|coexpression_cluster_id=C288 | |coexpression_cluster_id=C288 | ||
|description=CAGE_peak_11_at_BGN_5end | |description=CAGE_peak_11_at_BGN_5end | ||
|id=chrX:152770151..152770173,+ | |id=chrX:152770151..152770173,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.46e-23!180;CL:0000057!2.17e-13!75;CL:0000183!8.41e-13!59;CL:0000187!7.90e-12!54;CL:0000680!1.14e-11!57;CL:0000056!1.14e-11!57;CL:0000355!1.14e-11!57;CL:0000359!1.74e-11!32;CL:0000393!2.07e-10!60;CL:0000211!2.07e-10!60;CL:0000222!1.69e-09!119;CL:0000192!4.86e-09!42;CL:0000514!4.86e-09!42;CL:0002494!3.14e-07!16 | |ontology_enrichment_celltype=CL:0000055!8.46e-23!180;CL:0000057!2.17e-13!75;CL:0000183!8.41e-13!59;CL:0000187!7.90e-12!54;CL:0000680!1.14e-11!57;CL:0000056!1.14e-11!57;CL:0000355!1.14e-11!57;CL:0000359!1.74e-11!32;CL:0000393!2.07e-10!60;CL:0000211!2.07e-10!60;CL:0000222!1.69e-09!119;CL:0000192!4.86e-09!42;CL:0000514!4.86e-09!42;CL:0002494!3.14e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000327;5.33e-11;15!CL:0000359;2.71e-09;32!CL:0000499;3.58e-07;28!CL:0002620;6.76e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.02e-15,76;CL:0000327,1.06e-10,15;CL:0000359,1.95e-09,32;CL:0000499,4.60e-07,28;CL:0002620,5.42e-07,23;CL:0000222,7.52e-07,121;CL:0000187,9.39e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.06e-25!84;UBERON:0001009!7.30e-19!113;UBERON:0002049!8.79e-19!79;UBERON:0007798!8.79e-19!79;UBERON:0001981!1.23e-18!60;UBERON:0007500!1.23e-18!60;UBERON:0004537!1.23e-18!60;UBERON:0006965!1.23e-18!60;UBERON:0000055!2.90e-18!69;UBERON:0004535!5.02e-18!110;UBERON:0003914!1.71e-17!118;UBERON:0001637!1.12e-16!42;UBERON:0003509!1.12e-16!42;UBERON:0004572!1.12e-16!42;UBERON:0004573!9.31e-14!33;UBERON:0004571!9.31e-14!33;UBERON:0000477!1.49e-13!286;UBERON:0004111!4.36e-13!241;UBERON:0000025!1.39e-12!194;UBERON:0001134!2.38e-12!61;UBERON:0002036!2.38e-12!61;UBERON:0003082!2.38e-12!61;UBERON:0002385!3.34e-12!63;UBERON:0001015!3.34e-12!63;UBERON:0000383!3.34e-12!63;UBERON:0007100!9.66e-12!27;UBERON:0000948!5.47e-11!24;UBERON:0005498!5.47e-11!24;UBERON:0004140!5.47e-11!24;UBERON:0009881!5.47e-11!24;UBERON:0004141!5.47e-11!24;UBERON:0003084!5.47e-11!24;UBERON:0007005!5.47e-11!24;UBERON:0004139!5.47e-11!24;UBERON:0004291!5.47e-11!24;UBERON:0000914!1.31e-10!83;UBERON:0002329!1.31e-10!83;UBERON:0003077!1.31e-10!83;UBERON:0003059!1.31e-10!83;UBERON:0007282!1.31e-10!83;UBERON:0009618!1.31e-10!83;UBERON:0007285!1.31e-10!83;UBERON:0004290!5.20e-10!70;UBERON:0000947!2.20e-09!21;UBERON:0010191!2.20e-09!21;UBERON:0000119!3.82e-09!312;UBERON:0005256!1.45e-08!143;UBERON:0000490!1.70e-08!138;UBERON:0000483!2.37e-08!309;UBERON:0000475!6.01e-08!365;UBERON:0000486!1.44e-07!82;UBERON:0003103!6.98e-07!69 | |ontology_enrichment_uberon=UBERON:0004872!2.06e-25!84;UBERON:0001009!7.30e-19!113;UBERON:0002049!8.79e-19!79;UBERON:0007798!8.79e-19!79;UBERON:0001981!1.23e-18!60;UBERON:0007500!1.23e-18!60;UBERON:0004537!1.23e-18!60;UBERON:0006965!1.23e-18!60;UBERON:0000055!2.90e-18!69;UBERON:0004535!5.02e-18!110;UBERON:0003914!1.71e-17!118;UBERON:0001637!1.12e-16!42;UBERON:0003509!1.12e-16!42;UBERON:0004572!1.12e-16!42;UBERON:0004573!9.31e-14!33;UBERON:0004571!9.31e-14!33;UBERON:0000477!1.49e-13!286;UBERON:0004111!4.36e-13!241;UBERON:0000025!1.39e-12!194;UBERON:0001134!2.38e-12!61;UBERON:0002036!2.38e-12!61;UBERON:0003082!2.38e-12!61;UBERON:0002385!3.34e-12!63;UBERON:0001015!3.34e-12!63;UBERON:0000383!3.34e-12!63;UBERON:0007100!9.66e-12!27;UBERON:0000948!5.47e-11!24;UBERON:0005498!5.47e-11!24;UBERON:0004140!5.47e-11!24;UBERON:0009881!5.47e-11!24;UBERON:0004141!5.47e-11!24;UBERON:0003084!5.47e-11!24;UBERON:0007005!5.47e-11!24;UBERON:0004139!5.47e-11!24;UBERON:0004291!5.47e-11!24;UBERON:0000914!1.31e-10!83;UBERON:0002329!1.31e-10!83;UBERON:0003077!1.31e-10!83;UBERON:0003059!1.31e-10!83;UBERON:0007282!1.31e-10!83;UBERON:0009618!1.31e-10!83;UBERON:0007285!1.31e-10!83;UBERON:0004290!5.20e-10!70;UBERON:0000947!2.20e-09!21;UBERON:0010191!2.20e-09!21;UBERON:0000119!3.82e-09!312;UBERON:0005256!1.45e-08!143;UBERON:0000490!1.70e-08!138;UBERON:0000483!2.37e-08!309;UBERON:0000475!6.01e-08!365;UBERON:0000486!1.44e-07!82;UBERON:0003103!6.98e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.73e-12;33!UBERON:0004571;1.73e-12;33!UBERON:0001637;7.56e-12;42!UBERON:0003509;7.56e-12;42!UBERON:0004572;7.56e-12;42!UBERON:0000948;1.13e-09;22!UBERON:0000947;1.20e-09;21!UBERON:0010191;1.20e-09;21!UBERON:0007100;5.23e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.29e-19,83;UBERON:0000055,7.10e-15,68;UBERON:0007500,1.12e-14,59;UBERON:0001981,1.12e-14,59;UBERON:0004537,1.12e-14,59;UBERON:0006965,1.12e-14,59;UBERON:0004535,1.40e-14,109;UBERON:0001009,1.68e-14,112;UBERON:0001637,1.99e-14,42;UBERON:0003509,1.99e-14,42;UBERON:0004572,1.99e-14,42;UBERON:0002049,2.74e-14,78;UBERON:0007798,2.74e-14,78;UBERON:0003914,6.18e-14,117;UBERON:0004573,9.93e-14,33;UBERON:0004571,9.93e-14,33;UBERON:0000948,5.98e-11,24;UBERON:0005498,5.98e-11,24;UBERON:0004140,5.98e-11,24;UBERON:0009881,5.98e-11,24;UBERON:0004141,5.98e-11,24;UBERON:0003084,5.98e-11,24;UBERON:0007005,5.98e-11,24;UBERON:0004139,5.98e-11,24;UBERON:0004291,5.98e-11,24;UBERON:0007100,2.71e-10,27;UBERON:0000947,5.54e-10,21;UBERON:0010191,5.54e-10,21;UBERON:0002385,2.52e-07,64;UBERON:0001015,2.52e-07,64;UBERON:0000383,2.52e-07,64;UBERON:0001134,3.28e-07,62;UBERON:0002036,3.28e-07,62;UBERON:0003082,3.28e-07,62;UBERON:0004797,4.17e-07,7 | |||
|phase1_expression=0.363356758541113,2.5692062866918,0.140954404095971,1.0007329835313,0.893922188854576,3.48935409640147,0,0,0,0.491467873003018,0,0,0,0.74259811776028,1.98838425436749,4.03395087871065,3.01347264011988,5.84248072309899,2.43966399395253,0,1.83600622119828,1.56727360739044,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.383587685530591,2.53007406669196,1.00267582127178,5.35932120155048,19.8821486762775,35.5243455320924,0,0,0.351339142772504,0.72038491523742,0,0,0,0,0,0,0,0,0.39752481473341,0,1.73570250803797,1.69592382577203,0.838998872419812,0.825354125820202,1.04497483268405,0,0,1.00416183829401,0,0,1.46437234528902,0.735326160691737,5.67099363517232,0.17859945656816,0.673588117878509,0.900891843866578,3.06633274931766,0,0.732806975721629,0,0,0,6.95760732373446,5.69837302490609,0.264818361626438,15.7760141411848,5.67469411517371,2.80338800071154,5.33744978648525,5.67335361359468,0.311211035399766,3.50247747381189,1.63461903113459,7.26515652695671,9.79499071615998,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.413303124703062,0,2.47266929278557,0.910161361938026,0,0,0.625592599359821,0,1.31693286264251,2.45190236639216,1.50238058906597,1.24775401476023,2.51145489964407,1.2813443329114,1.48352330811693,2.10063767259082,1.95799805553034,2.06112432036503,1.67505170698431,2.36286865137773,3.99491721160914,2.77677151668526,1.47279837827679,3.87950536365149,5.32514388774922,1.10827308050404,2.54340888465731,0,0,0,0,0,0,0.10366105501537,0,0,0,7.71889125831462,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,1.2347220339942,4.41026134156626,0,0,4.13552934676983,0,0.368965315629341,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.469634776943287,1.58803092537181,2.31492756288305,3.42457474022277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,2.35475277125258,2.1798003441664,3.0802080044799,1.68053230485111,0,4.22651376278,0.26593811658487,0,0.257207374262142,0,0.799266537048298,0.142977993658148,1.08524321078289,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,5.99062138728957,3.44585807502342,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,3.6807447515742,5.50187573165645,1.08506009479894,13.7260768610333,19.2703307900935,10.5660618072736,9.01988895443892,3.31040709700491,18.1926003244788,6.2083842775503,3.32112799267718,2.58116835958384,0.0868836144680828,11.356467132839,16.8140277667319,0,0,0,0,0,0.30239029332968,0.496215615637554,2.14846762603287,8.13914273855913,0.768834895534206,2.04682899626681,5.14732547659544,1.48418066444991,2.46735510084249,2.13074070375753,0.164254312027618,0.519254429183621,1.74315567689939,0.241718899183244,0,0.0920809889358963,0.114814448164607,1.82091168006717,0.131124414959424,0,0,0.784349769176855,0,0,2.27466768141793,0.170093705276516,1.0795795805107,13.880452742126,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,1.33953315142039,0,0,0.574265537996172,0,1.6068392984416,0.580024309752732,1.3864375540318,2.14905144616581,0.275673144969061,0.644521469209642,1.16013355131383,1.02271952899321,3.38321735457602,0,0,0,0.10115778085555,0.464845549297286,6.61105928344344,0,1.84820148105653,2.66153015158511,1.73986598415015,2.03856641014312,0.429374660225974,0.744316738719335,1.2655176988749,0.38126038784765,0,0.42793898803392,0.95460974377781,6.27958912159384,0.179872457583315,0.274537029736055,0,1.41527737101321,0,1.68503382495592,0,3.41198885483798,4.22600587027022,0.545999645631943,0.141405431953713,1.13008116620243,0.551365343546124,7.29782872765342,4.38450885253763,0,0,0.202910376962704,2.78841148289775,5.07052084558035,0,0.392996164052485,0.7133421029625,0.709522128141196,2.53329162357197,2.30506425071931,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0.844501632511974,25.3044945078859,0,0,0,0,1.86623752597084,0,0,0,0.591860433821602,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0,1.09692698576986,0,0,1.38510465306835,0,0.23056390438806,0,0,0,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.22206028986725,0,0,0,0.202203398942031,4.81546588379273,0.468528891450678,0,0,0,0.789168805698781,0,0.30607276163049,2.27471686662557,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.39781334593624,0,0,0,0,0.581934098930517,0,4.06765333404958,0,0,0.126621591911757,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0.410716136675979,0,0,0,12.0091432547069,3.66656678418694,5.74298419661451,0.599037001496973,1.71690419254628,0.669514372325618,0.335917362433631,3.24269895188163,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.1362034061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| ||
|short_description=p11@BGN | |short_description=p11@BGN | ||
}} | }} |
Latest revision as of 23:43, 19 September 2015
Short description: | p11@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 6bp_to_AK298756_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | B4DQD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.02e-15 | 76 |
extracellular matrix secreting cell | 1.06e-10 | 15 |
vascular associated smooth muscle cell | 1.95e-09 | 32 |
stromal cell | 4.60e-07 | 28 |
skin fibroblast | 5.42e-07 | 23 |
mesodermal cell | 7.52e-07 | 121 |
muscle cell | 9.39e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.29e-19 | 83 |
vessel | 7.10e-15 | 68 |
epithelial tube open at both ends | 1.12e-14 | 59 |
blood vessel | 1.12e-14 | 59 |
blood vasculature | 1.12e-14 | 59 |
vascular cord | 1.12e-14 | 59 |
cardiovascular system | 1.40e-14 | 109 |
circulatory system | 1.68e-14 | 112 |
artery | 1.99e-14 | 42 |
arterial blood vessel | 1.99e-14 | 42 |
arterial system | 1.99e-14 | 42 |
vasculature | 2.74e-14 | 78 |
vascular system | 2.74e-14 | 78 |
epithelial tube | 6.18e-14 | 117 |
systemic artery | 9.93e-14 | 33 |
systemic arterial system | 9.93e-14 | 33 |
heart | 5.98e-11 | 24 |
primitive heart tube | 5.98e-11 | 24 |
primary heart field | 5.98e-11 | 24 |
anterior lateral plate mesoderm | 5.98e-11 | 24 |
heart tube | 5.98e-11 | 24 |
heart primordium | 5.98e-11 | 24 |
cardiac mesoderm | 5.98e-11 | 24 |
cardiogenic plate | 5.98e-11 | 24 |
heart rudiment | 5.98e-11 | 24 |
primary circulatory organ | 2.71e-10 | 27 |
aorta | 5.54e-10 | 21 |
aortic system | 5.54e-10 | 21 |
muscle tissue | 2.52e-07 | 64 |
musculature | 2.52e-07 | 64 |
musculature of body | 2.52e-07 | 64 |
skeletal muscle tissue | 3.28e-07 | 62 |
striated muscle tissue | 3.28e-07 | 62 |
myotome | 3.28e-07 | 62 |
blood vessel layer | 4.17e-07 | 7 |