FFCP PHASE1:Hg19::chrX:152770151..152770173,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQD6 | |UniProt=B4DQD6 | ||
|association_with_transcript=6bp_to_AK298756_5end | |association_with_transcript=6bp_to_AK298756_5end | ||
|cluster_id=chrX:152770151..152770173,+ | |||
|coexpression_cluster_id=C288 | |coexpression_cluster_id=C288 | ||
|description=CAGE_peak_11_at_BGN_5end | |description=CAGE_peak_11_at_BGN_5end | ||
|id=chrX:152770151..152770173,+ | |id=chrX:152770151..152770173,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.46e-23!180;CL:0000057!2.17e-13!75;CL:0000183!8.41e-13!59;CL:0000187!7.90e-12!54;CL:0000680!1.14e-11!57;CL:0000056!1.14e-11!57;CL:0000355!1.14e-11!57;CL:0000359!1.74e-11!32;CL:0000393!2.07e-10!60;CL:0000211!2.07e-10!60;CL:0000222!1.69e-09!119;CL:0000192!4.86e-09!42;CL:0000514!4.86e-09!42;CL:0002494!3.14e-07!16 | |ontology_enrichment_celltype=CL:0000055!8.46e-23!180;CL:0000057!2.17e-13!75;CL:0000183!8.41e-13!59;CL:0000187!7.90e-12!54;CL:0000680!1.14e-11!57;CL:0000056!1.14e-11!57;CL:0000355!1.14e-11!57;CL:0000359!1.74e-11!32;CL:0000393!2.07e-10!60;CL:0000211!2.07e-10!60;CL:0000222!1.69e-09!119;CL:0000192!4.86e-09!42;CL:0000514!4.86e-09!42;CL:0002494!3.14e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000327;5.33e-11;15!CL:0000359;2.71e-09;32!CL:0000499;3.58e-07;28!CL:0002620;6.76e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.02e-15,76;CL:0000327,1.06e-10,15;CL:0000359,1.95e-09,32;CL:0000499,4.60e-07,28;CL:0002620,5.42e-07,23;CL:0000222,7.52e-07,121;CL:0000187,9.39e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.73e-12;33!UBERON:0004571;1.73e-12;33!UBERON:0001637;7.56e-12;42!UBERON:0003509;7.56e-12;42!UBERON:0004572;7.56e-12;42!UBERON:0000948;1.13e-09;22!UBERON:0000947;1.20e-09;21!UBERON:0010191;1.20e-09;21!UBERON:0007100;5.23e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.29e-19,83;UBERON:0000055,7.10e-15,68;UBERON:0007500,1.12e-14,59;UBERON:0001981,1.12e-14,59;UBERON:0004537,1.12e-14,59;UBERON:0006965,1.12e-14,59;UBERON:0004535,1.40e-14,109;UBERON:0001009,1.68e-14,112;UBERON:0001637,1.99e-14,42;UBERON:0003509,1.99e-14,42;UBERON:0004572,1.99e-14,42;UBERON:0002049,2.74e-14,78;UBERON:0007798,2.74e-14,78;UBERON:0003914,6.18e-14,117;UBERON:0004573,9.93e-14,33;UBERON:0004571,9.93e-14,33;UBERON:0000948,5.98e-11,24;UBERON:0005498,5.98e-11,24;UBERON:0004140,5.98e-11,24;UBERON:0009881,5.98e-11,24;UBERON:0004141,5.98e-11,24;UBERON:0003084,5.98e-11,24;UBERON:0007005,5.98e-11,24;UBERON:0004139,5.98e-11,24;UBERON:0004291,5.98e-11,24;UBERON:0007100,2.71e-10,27;UBERON:0000947,5.54e-10,21;UBERON:0010191,5.54e-10,21;UBERON:0002385,2.52e-07,64;UBERON:0001015,2.52e-07,64;UBERON:0000383,2.52e-07,64;UBERON:0001134,3.28e-07,62;UBERON:0002036,3.28e-07,62;UBERON:0003082,3.28e-07,62;UBERON:0004797,4.17e-07,7 | |||
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| ||
|short_description=p11@BGN | |short_description=p11@BGN | ||
}} | }} |
Latest revision as of 23:43, 19 September 2015
Short description: | p11@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 6bp_to_AK298756_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | B4DQD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.02e-15 | 76 |
extracellular matrix secreting cell | 1.06e-10 | 15 |
vascular associated smooth muscle cell | 1.95e-09 | 32 |
stromal cell | 4.60e-07 | 28 |
skin fibroblast | 5.42e-07 | 23 |
mesodermal cell | 7.52e-07 | 121 |
muscle cell | 9.39e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.29e-19 | 83 |
vessel | 7.10e-15 | 68 |
epithelial tube open at both ends | 1.12e-14 | 59 |
blood vessel | 1.12e-14 | 59 |
blood vasculature | 1.12e-14 | 59 |
vascular cord | 1.12e-14 | 59 |
cardiovascular system | 1.40e-14 | 109 |
circulatory system | 1.68e-14 | 112 |
artery | 1.99e-14 | 42 |
arterial blood vessel | 1.99e-14 | 42 |
arterial system | 1.99e-14 | 42 |
vasculature | 2.74e-14 | 78 |
vascular system | 2.74e-14 | 78 |
epithelial tube | 6.18e-14 | 117 |
systemic artery | 9.93e-14 | 33 |
systemic arterial system | 9.93e-14 | 33 |
heart | 5.98e-11 | 24 |
primitive heart tube | 5.98e-11 | 24 |
primary heart field | 5.98e-11 | 24 |
anterior lateral plate mesoderm | 5.98e-11 | 24 |
heart tube | 5.98e-11 | 24 |
heart primordium | 5.98e-11 | 24 |
cardiac mesoderm | 5.98e-11 | 24 |
cardiogenic plate | 5.98e-11 | 24 |
heart rudiment | 5.98e-11 | 24 |
primary circulatory organ | 2.71e-10 | 27 |
aorta | 5.54e-10 | 21 |
aortic system | 5.54e-10 | 21 |
muscle tissue | 2.52e-07 | 64 |
musculature | 2.52e-07 | 64 |
musculature of body | 2.52e-07 | 64 |
skeletal muscle tissue | 3.28e-07 | 62 |
striated muscle tissue | 3.28e-07 | 62 |
myotome | 3.28e-07 | 62 |
blood vessel layer | 4.17e-07 | 7 |