FFCP PHASE2:Hg19::chrX:152771355..152771373,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:633 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1044 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1044 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 23:47, 19 September 2015
Short description: | p17@BGN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 28bp_to_ENST00000492658_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p17@BGN |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.35e-16 | 76 |
vascular associated smooth muscle cell | 4.39e-13 | 32 |
extracellular matrix secreting cell | 2.26e-08 | 15 |
smooth muscle cell | 2.58e-08 | 43 |
smooth muscle myoblast | 2.58e-08 | 43 |
muscle cell | 1.16e-07 | 55 |
muscle precursor cell | 5.74e-07 | 58 |
myoblast | 5.74e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.74e-07 | 58 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.34e-24 | 83 |
epithelial tube open at both ends | 1.23e-21 | 59 |
blood vessel | 1.23e-21 | 59 |
blood vasculature | 1.23e-21 | 59 |
vascular cord | 1.23e-21 | 59 |
vessel | 7.12e-20 | 68 |
vasculature | 1.06e-19 | 78 |
vascular system | 1.06e-19 | 78 |
artery | 1.41e-19 | 42 |
arterial blood vessel | 1.41e-19 | 42 |
Showing 1 to 10 of 36 entries