FFCP PHASE1:Hg19::chr12:6647043..6647106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2597 | |EntrezGene=2597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4141 | |HGNC=4141 | ||
|TSSclassifier=strong | |||
|UniProt=Q16768 | |UniProt=Q16768 | ||
|association_with_transcript=0bp_to_M28283_5end | |association_with_transcript=0bp_to_M28283_5end | ||
|cluster_id=chr12:6647043..6647106,+ | |||
|description=CAGE_peak_2_at_GAPDH_5end | |description=CAGE_peak_2_at_GAPDH_5end | ||
|id=chr12:6647043..6647106,+ | |id=chr12:6647043..6647106,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.29e-07!679;CL:0000004!3.29e-07!679;CL:0000255!3.29e-07!679;CL:0000012!6.64e-07!682 | |ontology_enrichment_celltype=CL:0000548!3.29e-07!679;CL:0000004!3.29e-07!679;CL:0000255!3.29e-07!679;CL:0000012!6.64e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.02e-07;33!CL:0002057;6.02e-07;33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.32e-08!69;UBERON:0001637!4.27e-08!42;UBERON:0003509!4.27e-08!42;UBERON:0004572!4.27e-08!42;UBERON:0001981!6.43e-08!60;UBERON:0007500!6.43e-08!60;UBERON:0004537!6.43e-08!60;UBERON:0006965!6.43e-08!60;UBERON:0000486!2.71e-07!82;UBERON:0002049!4.85e-07!79;UBERON:0007798!4.85e-07!79;UBERON:0004290!7.01e-07!70 | |ontology_enrichment_uberon=UBERON:0000055!1.32e-08!69;UBERON:0001637!4.27e-08!42;UBERON:0003509!4.27e-08!42;UBERON:0004572!4.27e-08!42;UBERON:0001981!6.43e-08!60;UBERON:0007500!6.43e-08!60;UBERON:0004537!6.43e-08!60;UBERON:0006965!6.43e-08!60;UBERON:0000486!2.71e-07!82;UBERON:0002049!4.85e-07!79;UBERON:0007798!4.85e-07!79;UBERON:0004290!7.01e-07!70 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.23e-08,68;UBERON:0001637,4.95e-08,42;UBERON:0003509,4.95e-08,42;UBERON:0004572,4.95e-08,42;UBERON:0007500,9.84e-08,59;UBERON:0001981,9.84e-08,59;UBERON:0004537,9.84e-08,59;UBERON:0006965,9.84e-08,59;UBERON:0007503,2.55e-07,78;UBERON:0000486,3.27e-07,83;UBERON:0002329,7.15e-07,71;UBERON:0003059,7.15e-07,71;UBERON:0007282,7.15e-07,71;UBERON:0004290,7.15e-07,71;UBERON:0009618,7.15e-07,71;UBERON:0007524,7.73e-07,73 | |||
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| ||
|short_description=p2@GAPDH | |short_description=p2@GAPDH | ||
}} | }} |
Latest revision as of 00:03, 20 September 2015
Short description: | p2@GAPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GAPDH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_M28283_5end |
EntrezGene: | GAPDH |
HGNC: | 4141 |
UniProt: | Q16768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vessel | 2.23e-08 | 68 |
artery | 4.95e-08 | 42 |
arterial blood vessel | 4.95e-08 | 42 |
arterial system | 4.95e-08 | 42 |
epithelial tube open at both ends | 9.84e-08 | 59 |
blood vessel | 9.84e-08 | 59 |
blood vasculature | 9.84e-08 | 59 |
vascular cord | 9.84e-08 | 59 |
epithelial vesicle | 2.55e-07 | 78 |
multilaminar epithelium | 3.27e-07 | 83 |
somite | 7.15e-07 | 71 |
presomitic mesoderm | 7.15e-07 | 71 |
presumptive segmental plate | 7.15e-07 | 71 |
dermomyotome | 7.15e-07 | 71 |
trunk paraxial mesoderm | 7.15e-07 | 71 |
dense mesenchyme tissue | 7.73e-07 | 73 |