FFCP PHASE2:Hg19::chrX:152774321..152774336,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:633 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:1044 |...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=1044 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P21810 | ||
|association_with_transcript=445bp_to_U11686_5end | |association_with_transcript=445bp_to_U11686_5end | ||
|cluster_id=chrX:152774321..152774336,+ | |cluster_id=chrX:152774321..152774336,+ |
Latest revision as of 00:13, 20 September 2015
Short description: | p26@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 445bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p26@BGN |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 1.01e-08 | 15 |
stromal cell | 1.21e-07 | 28 |
fibroblast | 1.35e-07 | 76 |
vascular associated smooth muscle cell | 2.04e-07 | 32 |
fibrocyte | 2.20e-07 | 3 |
tendon cell | 2.20e-07 | 3 |
receptor cell | 2.50e-07 | 6 |
sensory epithelial cell | 2.50e-07 | 6 |
olfactory epithelial cell | 2.50e-07 | 6 |
chondroblast | 6.14e-07 | 6 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
artery | 2.67e-11 | 42 |
arterial blood vessel | 2.67e-11 | 42 |
arterial system | 2.67e-11 | 42 |
epithelial tube | 2.17e-10 | 117 |
systemic artery | 3.29e-10 | 33 |
systemic arterial system | 3.29e-10 | 33 |
splanchnic layer of lateral plate mesoderm | 1.55e-09 | 83 |
epithelial tube open at both ends | 3.95e-09 | 59 |
blood vessel | 3.95e-09 | 59 |
blood vasculature | 3.95e-09 | 59 |
Showing 1 to 10 of 30 entries