FFCP PHASE1:Hg19::chr3:99986062..99986093,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55773 | |EntrezGene=55773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=25622 | |HGNC=25622 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=C9IZ32 | |UniProt=C9IZ32 | ||
|association_with_transcript=26bp_to_ENST00000471098_5end | |association_with_transcript=26bp_to_ENST00000471098_5end | ||
|cluster_id=chr3:99986062..99986093,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_8_at_TBC1D23_5end | |description=CAGE_peak_8_at_TBC1D23_5end | ||
Latest revision as of 00:55, 20 September 2015
| Short description: | p8@TBC1D23 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_TBC1D23_5end |
| Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
| Association with transcript: | 26bp_to_ENST00000471098_5end |
| EntrezGene: | TBC1D23 |
| HGNC: | 25622 |
| UniProt: | C9IZ32 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@TBC1D23 |
|---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
| glial cell | 4.22e-13 | 15 |
| glioblast | 4.22e-13 | 15 |
| glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
| neuron associated cell | 6.95e-12 | 17 |
| neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
| neural cell | 8.32e-09 | 25 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system cancer | 6.76e-18 | 11 |
Showing 1 to 1 of 1 entries
