FFCP PHASE1:Hg19::chr12:6748384..6748425,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6748384..6748425,-
|short_description=p3@LPAR5
|description=CAGE_peak_3_at_LPAR5_5end
|association_with_transcript=-181bp_to_uc010sff.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57121 | |EntrezGene=57121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13307 | |HGNC=13307 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-181bp_to_uc010sff.1_5end | |||
|cluster_id=chr12:6748384..6748425,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_LPAR5_5end | |||
|id=chr12:6748384..6748425,- | |||
|ontology_enrichment_celltype=CL:0000037!1.89e-27!172;CL:0000566!1.89e-27!172;CL:0002032!7.36e-26!165;CL:0000837!7.36e-26!165;CL:0000988!1.23e-25!182;CL:0000738!6.60e-21!140;CL:0000763!5.37e-18!112;CL:0000049!5.37e-18!112;CL:0002031!3.28e-15!124;CL:0002087!6.15e-15!119;CL:0000094!1.01e-13!8;CL:0000766!2.08e-13!76;CL:0000625!7.23e-11!11;CL:0000081!2.07e-09!11;CL:0002057!3.51e-09!42;CL:0000839!1.42e-08!70;CL:0000791!1.46e-08!18;CL:0000789!1.46e-08!18;CL:0002420!1.46e-08!18;CL:0002419!1.46e-08!18;CL:0000790!1.46e-08!18;CL:0000860!3.27e-08!45;CL:0000236!5.16e-08!14;CL:0000838!7.36e-08!52;CL:0000542!1.32e-07!53;CL:0000051!1.32e-07!53;CL:0000557!9.20e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.24e-28;8!CL:0000081;4.82e-20;11!CL:0000236;4.23e-12;13!CL:0000775;9.55e-12;3!CL:0000226;1.60e-11;3!CL:0000842;1.60e-11;3!CL:0000767;2.40e-11;3!CL:0000771;1.82e-08;2!CL:0000764;2.35e-07;2!CL:0000558;2.35e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.49e-28,8;CL:0000081,5.02e-20,11;CL:0000037,3.99e-16,168;CL:0000988,6.97e-15,177;CL:0002032,1.63e-13,161;CL:0000837,1.63e-13,161;CL:0000775,9.39e-12,3;CL:0000226,1.66e-11,3;CL:0000842,1.66e-11,3;CL:0000767,2.53e-11,3;CL:0000236,3.97e-11,14;CL:0000763,9.25e-11,108;CL:0000049,9.25e-11,108;CL:0000738,1.45e-08,136;CL:0000771,1.85e-08,2;CL:0000764,2.97e-07,2;CL:0000765,2.97e-07,2;CL:0000050,2.97e-07,2;CL:0000038,2.97e-07,2;CL:0000558,2.97e-07,2;CL:0000547,2.97e-07,2;CL:0000549,2.97e-07,2;CL:0000550,2.97e-07,2;CL:0000552,2.97e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.39e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.06e-14;8!DOID:8692;3.35e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.03e-14,8;DOID:8692,3.33e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.12e-15!15;UBERON:0000179!1.12e-15!15;UBERON:0000463!1.12e-15!15;UBERON:0002390!7.68e-14!102;UBERON:0003061!7.68e-14!102;UBERON:0007023!1.21e-11!115;UBERON:0002193!1.42e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.11e-34;15!UBERON:0000179;6.11e-34;15!UBERON:0000463;6.11e-34;15!UBERON:0002390;9.16e-19;32!UBERON:0002193;5.53e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.31e-34,15;UBERON:0000179,6.31e-34,15;UBERON:0000463,6.31e-34,15;UBERON:0002390,2.01e-07,98;UBERON:0003061,2.01e-07,98 | |||
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| ||
|short_description=p3@LPAR5 | |||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p3@LPAR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LPAR5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -181bp_to_uc010sff.1_5end |
EntrezGene: | LPAR5 |
HGNC: | 13307 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.49e-28 | 8 |
blood cell | 5.02e-20 | 11 |
hematopoietic stem cell | 3.99e-16 | 168 |
hematopoietic cell | 6.97e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.63e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-13 | 161 |
neutrophil | 9.39e-12 | 3 |
single nucleate cell | 1.66e-11 | 3 |
mononuclear cell | 1.66e-11 | 3 |
basophil | 2.53e-11 | 3 |
B cell | 3.97e-11 | 14 |
myeloid cell | 9.25e-11 | 108 |
common myeloid progenitor | 9.25e-11 | 108 |
leukocyte | 1.45e-08 | 136 |
eosinophil | 1.85e-08 | 2 |
erythroid lineage cell | 2.97e-07 | 2 |
erythroblast | 2.97e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.97e-07 | 2 |
erythroid progenitor cell | 2.97e-07 | 2 |
reticulocyte | 2.97e-07 | 2 |
proerythroblast | 2.97e-07 | 2 |
basophilic erythroblast | 2.97e-07 | 2 |
polychromatophilic erythroblast | 2.97e-07 | 2 |
orthochromatic erythroblast | 2.97e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.31e-34 | 15 |
haemolymphatic fluid | 6.31e-34 | 15 |
organism substance | 6.31e-34 | 15 |
hematopoietic system | 2.01e-07 | 98 |
blood island | 2.01e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.03e-14 | 8 |
myeloid leukemia | 3.33e-07 | 31 |