FFCP PHASE1:Hg19::chr6:87797935..87797943,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:87797935..87797943,-
|short_description=p2@CGA
|description=CAGE_peak_2_at_CGA_5end
|association_with_transcript=-15bp_to_HQ448725_5end
|EntrezGene=1081
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1081 | |EntrezGene=1081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1885 | |HGNC=1885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_HQ448725_5end | |||
|cluster_id=chr6:87797935..87797943,- | |||
|coexpression_cluster_id=C285 | |||
|description=CAGE_peak_2_at_CGA_5end | |||
|id=chr6:87797935..87797943,- | |||
|ontology_enrichment_celltype=CL:0002150!1.83e-30!3;CL:0000861!1.83e-30!3;CL:0000235!1.45e-09!10 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.91e-41;1!UBERON:0004872;5.38e-07;7 | |||
|ontology_enrichment_disease=DOID:1799!3.28e-11!1;DOID:10165!3.28e-11!1;DOID:1798!3.28e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000007!3.84e-21!2;UBERON:0002134!1.97e-11!1;UBERON:0005208!1.97e-11!1;UBERON:0005946!1.97e-11!1;UBERON:0005965!1.97e-11!1;UBERON:0002078!1.97e-11!1;UBERON:0003296!4.68e-11!4;UBERON:0010133!4.68e-11!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.80e-11;4!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0000995,1.27e-08,21;UBERON:0005795,2.82e-08,22;UBERON:0003975,2.82e-08,22;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6;UBERON:0004175,2.14e-07,25;UBERON:0003124,5.38e-07,7 | |||
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|short_description=p2@CGA | |||
}} | }} |
Latest revision as of 01:52, 20 September 2015
Short description: | p2@CGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CGA_5end |
Coexpression cluster: | C285_cervical_Hep2_small_colon_temporal_duodenum_bronchogenic |
Association with transcript: | -15bp_to_HQ448725_5end |
EntrezGene: | CGA |
HGNC: | 1885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placenta | 2.80e-11 | 4 |
allantois | 2.80e-11 | 4 |
uterus | 1.27e-08 | 21 |
embryonic uterus | 2.82e-08 | 22 |
internal female genitalia | 2.82e-08 | 22 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
internal genitalia | 2.14e-07 | 25 |
chorion | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.53e-09 | 5 |