FFCP PHASE1:Hg19::chr12:68619646..68619653,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17119 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPH9 | |||
|association_with_transcript=-45bp_to_ENST00000229134_5end | |||
|cluster_id=chr12:68619646..68619653,- | |||
|description=CAGE_peak_2_at_IL26_5end | |||
|id=chr12:68619646..68619653,- | |||
|ontology_enrichment_celltype=CL:0000327!2.18e-12!14;CL:0000153!1.34e-10!9;CL:0000447!1.34e-10!9;CL:0000499!1.20e-09!27;CL:0002549!1.87e-08!2;CL:0000151!4.41e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002092;2.24e-17;10!CL:0002540;1.50e-16;6!CL:0000153;3.37e-11;9!CL:0000447;3.37e-11;9!CL:0002569;6.38e-08;6!CL:0000138;6.49e-08;6!CL:0000327;6.44e-07;15!CL:0000054;8.93e-07;2!CL:0000137;8.93e-07;2!CL:0000092;8.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.29e-17,10;CL:0002540,1.54e-16,6;CL:0000153,3.20e-11,9;CL:0000447,3.20e-11,9;CL:0002569,6.16e-08,6;CL:0000058,6.16e-08,6;CL:0000138,6.16e-08,6;CL:0000327,6.24e-07,15;CL:0000054,8.93e-07,2;CL:0000137,8.93e-07,2;CL:0000092,8.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;4.78e-12;1!DOID:0060060;1.32e-11;1!DOID:0060061;1.32e-11;1!DOID:8691;1.32e-11;1!DOID:200;8.93e-07;2!DOID:4305;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.05e-12,1;DOID:0060060,9.61e-12,1;DOID:0060061,9.61e-12,1;DOID:8691,9.61e-12,1;DOID:200,8.93e-07,2;DOID:4305,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005284!4.80e-12!5;UBERON:0003947!1.87e-08!2;UBERON:0005629!1.87e-08!2;UBERON:0005358!1.87e-08!2;UBERON:0001886!1.87e-08!2;UBERON:0004086!1.87e-08!2;UBERON:0005282!1.87e-08!2;UBERON:0005281!1.87e-08!2;UBERON:0002200!5.23e-08!11;UBERON:0006876!5.23e-08!11;UBERON:0004905!1.90e-07!5;UBERON:0000982!1.90e-07!5;UBERON:0004770!1.90e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;1.59e-14;12!UBERON:0001282;4.06e-12;1!UBERON:0009842;4.06e-12;1!UBERON:0003704;4.06e-12;1!UBERON:0001171;4.06e-12;1!UBERON:0001172;4.06e-12;1!UBERON:0001474;9.38e-10;18!UBERON:0003422;6.38e-08;6!UBERON:0001434;2.18e-07;36!UBERON:0003104;6.58e-07;7!UBERON:0009142;6.58e-07;7!UBERON:0004765;8.46e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.06e-12,1;UBERON:0009842,4.06e-12,1;UBERON:0003704,4.06e-12,1;UBERON:0001171,4.06e-12,1;UBERON:0001172,4.06e-12,1;UBERON:0003422,6.16e-08,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0,1.28091319725675,1.30059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.255725123687061,4.69870898099936,0.50133791063589,1.30361867064741,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0.808264032418128,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15662369942424,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2655176988749,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,21.4041680423936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75695884329714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,5.35527662480906,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,2.08343305802598,14.3393703998968,3.55924488638614,1.14420034198462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5015436325629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@IL26 | |||
}} |
Latest revision as of 02:22, 20 September 2015
Short description: | p2@IL26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL26_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000229134_5end |
EntrezGene: | IL26 |
HGNC: | 17119 |
UniProt: | Q9NPH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.29e-17 | 10 |
mesenchymal stem cell of the bone marrow | 1.54e-16 | 6 |
GAG secreting cell | 3.20e-11 | 9 |
carbohydrate secreting cell | 3.20e-11 | 9 |
mesenchymal stem cell of umbilical cord | 6.16e-08 | 6 |
chondroblast | 6.16e-08 | 6 |
chondrocyte | 6.16e-08 | 6 |
extracellular matrix secreting cell | 6.24e-07 | 15 |
bone matrix secreting cell | 8.93e-07 | 2 |
osteocyte | 8.93e-07 | 2 |
osteoclast | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.06e-12 | 1 |
acinus | 4.06e-12 | 1 |
intrahepatic bile duct | 4.06e-12 | 1 |
portal lobule | 4.06e-12 | 1 |
hepatic acinus | 4.06e-12 | 1 |
mesenchyme of umbilical cord | 6.16e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.05e-12 | 1 |
non-Hodgkin lymphoma | 9.61e-12 | 1 |
cutaneous T cell lymphoma | 9.61e-12 | 1 |
mycosis fungoides | 9.61e-12 | 1 |
giant cell tumor | 8.93e-07 | 2 |
bone giant cell tumor | 8.93e-07 | 2 |