FFCP PHASE1:Hg19::chr3:124606049..124606060,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3693 | |EntrezGene=3693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6160 | |HGNC=6160 | ||
|TSSclassifier=strong | |||
|UniProt=P18084 | |UniProt=P18084 | ||
|association_with_transcript=83bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | |association_with_transcript=83bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | ||
|cluster_id=chr3:124606049..124606060,- | |||
|coexpression_cluster_id=C2716 | |||
|description=CAGE_peak_9_at_ITGB5_5end | |description=CAGE_peak_9_at_ITGB5_5end | ||
|id=chr3:124606049..124606060,- | |id=chr3:124606049..124606060,- | ||
|ontology_enrichment_celltype=CL:0000055!5.56e-22!180;CL:0000136!9.61e-11!15;CL:0000057!3.40e-10!75;CL:0000680!3.90e-09!57;CL:0000056!3.90e-09!57;CL:0000355!3.90e-09!57;CL:0000183!5.66e-09!59;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0000187!6.80e-08!54;CL:0000325!1.12e-07!39;CL:0000393!2.02e-07!60;CL:0000211!2.02e-07!60;CL:0000359!5.50e-07!32 | |ontology_enrichment_celltype=CL:0000055!5.56e-22!180;CL:0000136!9.61e-11!15;CL:0000057!3.40e-10!75;CL:0000680!3.90e-09!57;CL:0000056!3.90e-09!57;CL:0000355!3.90e-09!57;CL:0000183!5.66e-09!59;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0000187!6.80e-08!54;CL:0000325!1.12e-07!39;CL:0000393!2.02e-07!60;CL:0000211!2.02e-07!60;CL:0000359!5.50e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.84e-17;13!CL:0002334;5.54e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.79e-19,15;CL:0002334,1.42e-09,12;CL:0000048,2.35e-09,427;CL:0000723,7.68e-09,433;CL:0000034,1.43e-08,441;CL:0000057,4.94e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.74e-07;14 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.15e-11!659;UBERON:0002100!5.39e-11!216;UBERON:0000475!3.00e-10!365;UBERON:0004923!1.31e-09!57;UBERON:0000467!1.67e-09!625;UBERON:0005256!2.05e-09!143;UBERON:0000480!2.62e-09!626;UBERON:0000486!5.50e-09!82;UBERON:0004290!7.09e-09!70;UBERON:0003914!1.12e-08!118;UBERON:0000914!1.47e-08!83;UBERON:0002329!1.47e-08!83;UBERON:0003077!1.47e-08!83;UBERON:0003059!1.47e-08!83;UBERON:0007282!1.47e-08!83;UBERON:0009618!1.47e-08!83;UBERON:0007285!1.47e-08!83;UBERON:0004872!2.16e-08!84;UBERON:0001134!6.80e-08!61;UBERON:0002036!6.80e-08!61;UBERON:0003082!6.80e-08!61;UBERON:0003104!7.10e-08!238;UBERON:0009142!7.10e-08!238;UBERON:0002385!7.26e-08!63;UBERON:0001015!7.26e-08!63;UBERON:0000383!7.26e-08!63;UBERON:0001981!2.44e-07!60;UBERON:0007500!2.44e-07!60;UBERON:0004537!2.44e-07!60;UBERON:0006965!2.44e-07!60;UBERON:0000481!2.75e-07!347;UBERON:0000483!3.17e-07!309;UBERON:0000119!3.20e-07!312 | |ontology_enrichment_uberon=UBERON:0000468!1.15e-11!659;UBERON:0002100!5.39e-11!216;UBERON:0000475!3.00e-10!365;UBERON:0004923!1.31e-09!57;UBERON:0000467!1.67e-09!625;UBERON:0005256!2.05e-09!143;UBERON:0000480!2.62e-09!626;UBERON:0000486!5.50e-09!82;UBERON:0004290!7.09e-09!70;UBERON:0003914!1.12e-08!118;UBERON:0000914!1.47e-08!83;UBERON:0002329!1.47e-08!83;UBERON:0003077!1.47e-08!83;UBERON:0003059!1.47e-08!83;UBERON:0007282!1.47e-08!83;UBERON:0009618!1.47e-08!83;UBERON:0007285!1.47e-08!83;UBERON:0004872!2.16e-08!84;UBERON:0001134!6.80e-08!61;UBERON:0002036!6.80e-08!61;UBERON:0003082!6.80e-08!61;UBERON:0003104!7.10e-08!238;UBERON:0009142!7.10e-08!238;UBERON:0002385!7.26e-08!63;UBERON:0001015!7.26e-08!63;UBERON:0000383!7.26e-08!63;UBERON:0001981!2.44e-07!60;UBERON:0007500!2.44e-07!60;UBERON:0004537!2.44e-07!60;UBERON:0006965!2.44e-07!60;UBERON:0000481!2.75e-07!347;UBERON:0000483!3.17e-07!309;UBERON:0000119!3.20e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.42e-09;6!UBERON:0002358;2.42e-09;6!UBERON:0003684;2.42e-09;6!UBERON:0001178;2.42e-09;6!UBERON:0004457;1.13e-07;9!UBERON:0000042;1.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.36e-09,6;UBERON:0002358,2.36e-09,6;UBERON:0003684,2.36e-09,6;UBERON:0001178,2.36e-09,6;UBERON:0004923,1.12e-07,66;UBERON:0007503,1.56e-07,78;UBERON:0004573,2.12e-07,33;UBERON:0004571,2.12e-07,33;UBERON:0001637,5.02e-07,42;UBERON:0003509,5.02e-07,42;UBERON:0004572,5.02e-07,42 | |||
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| ||
|short_description=p9@ITGB5 | |short_description=p9@ITGB5 | ||
}} | }} |
Latest revision as of 02:40, 20 September 2015
Short description: | p9@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ITGB5_5end |
Coexpression cluster: | C2716_Osteoblast_leiomyoma_Preadipocyte_Adipocyte_mesenchymal_Smooth_Mesothelial |
Association with transcript: | 83bp_to_ENST00000296181, NM_002213, uc003eho.2_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | P18084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.79e-19 | 15 |
preadipocyte | 1.42e-09 | 12 |
multi fate stem cell | 2.35e-09 | 427 |
somatic stem cell | 7.68e-09 | 433 |
stem cell | 1.43e-08 | 441 |
fibroblast | 4.94e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.36e-09 | 6 |
peritoneum | 2.36e-09 | 6 |
abdominal cavity | 2.36e-09 | 6 |
visceral peritoneum | 2.36e-09 | 6 |
organ component layer | 1.12e-07 | 66 |
epithelial vesicle | 1.56e-07 | 78 |
systemic artery | 2.12e-07 | 33 |
systemic arterial system | 2.12e-07 | 33 |
artery | 5.02e-07 | 42 |
arterial blood vessel | 5.02e-07 | 42 |
arterial system | 5.02e-07 | 42 |