FFCP PHASE1:Hg19::chr3:126194866..126194887,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79364 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28160 | |||
|TSSclassifier=strong | |||
|UniProt=Q2QGD7 | |||
|association_with_transcript=-104bp_to_ENST00000389709,NM_001040653,NM_025112,uc003eiv.2,uc003eix.2,uc010hsh.2_5end | |||
|cluster_id=chr3:126194866..126194887,- | |||
|description=CAGE_peak_3_at_ZXDC_5end | |||
|id=chr3:126194866..126194887,- | |||
|ontology_enrichment_celltype=CL:0000037!7.66e-14!172;CL:0000566!7.66e-14!172;CL:0000988!8.19e-13!182;CL:0000860!5.19e-12!45;CL:0002057!1.10e-11!42;CL:0002032!3.06e-11!165;CL:0000837!3.06e-11!165;CL:0000738!5.23e-11!140;CL:0002087!9.78e-10!119;CL:0002031!1.55e-09!124;CL:0000763!1.35e-08!112;CL:0000049!1.35e-08!112;CL:0000557!1.10e-07!71;CL:0002009!6.03e-07!65;CL:0000766!8.49e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.45e-09;6!CL:0000623;1.72e-07;3!CL:0000784;3.43e-07;3!CL:0000767;5.96e-07;3!CL:0000226;8.30e-07;3!CL:0000842;8.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.58e-19,168;CL:0000738,8.35e-19,136;CL:0000988,1.74e-18,177;CL:0002032,7.95e-14,161;CL:0000837,7.95e-14,161;CL:0002087,1.10e-12,115;CL:0002031,8.18e-12,120;CL:0000624,4.47e-09,6;CL:0000766,2.78e-08,72;CL:0000763,3.14e-08,108;CL:0000049,3.14e-08,108;CL:0000860,5.74e-08,42;CL:0002057,5.74e-08,42;CL:0000623,1.49e-07,3;CL:0000825,1.49e-07,3;CL:0000557,1.86e-07,67;CL:0000784,3.74e-07,3;CL:0000767,4.41e-07,3;CL:0000226,8.41e-07,3;CL:0000842,8.41e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.04e-08!86;UBERON:0001017!2.31e-08!82;UBERON:0000073!6.62e-08!94;UBERON:0001016!6.62e-08!94;UBERON:0002390!6.62e-07!102;UBERON:0003061!6.62e-07!102;UBERON:0001049!8.46e-07!57;UBERON:0005068!8.46e-07!57;UBERON:0006241!8.46e-07!57;UBERON:0007135!8.46e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.86e-08,98;UBERON:0003061,2.86e-08,98;UBERON:0002193,6.82e-07,108;UBERON:0002371,8.54e-07,76 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0.85870796139317,0.410623275218653,0.502170558379211,0.152826811495903,0.328402357799783,0.236132343941038,3.14691421479123,1.91914699048606,2.16742572642506,0,0,0,0.154934401160603,0.142169232487422,2.05520307534393,1.66198622559563,4.8130667392834,3.03815219002193,0.447830948479849,0,0,0.145398238779565,0,0.970336244751265,0.232429036905685,0.411167888021826,0.929119112685311,0.863077176966451,1.7931249457037,0.47296445977717,1.03423704220986,0.645484683583826,0,0.941211697713023,0.818718450173537,0.674170453335254,1.53041946185451,1.28371610830437,2.55734850319616,0.329851300186716,0.199463657621632,0.852449501065388,1.16083695451434,0.56738522469114,0.622822248995575,2.26123798731069,1.5644487552606,1.95469960234605,1.81619850790011,2.20966581592539,0.316462387440884,0.633765858935825,0.212604299965044,0.419317291016752,0.786300418025466,0.750884464207532,0.64290234678832,1.14005097496499,1.39241674039363,0.91332076882317,0,0,0,0,0,0,0,0.954053754535364,1.70763890732835,2.34894875748376,4.58727873750275,3.96513985737078,2.80254281490768,1.58030450865046,5.11445402295966,6.6811829667358,2.67281948699362,0.167186495390678,2.93330039970231,4.73447805734733,0,0.334231370655521,0.589211814949674,1.55073726208535,0.541607727530031,0.25618263945135,0.650296737799391,0.493313713811028,0,0,4.30031033169975,1.33770414044857,5.22677619024884,0.339928028092699,1.14966148080576,4.46715679127419,0.506039384039006,0.318565414324097,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0.473554504088034,0.821127996921047,3.02410114837099,2.94184215361858,2.89648807765598,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0.973269740605272,0.756278537312543,0,0.263504357079378,0.589405839739707,0,0.741568885568859,0,0,0,2.62339686735876,2.28797964312051,2.22874500797739,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.450445921933289,1.53316637465883,0.949265659568129,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0.24666754841716,0,0.404132016209064,0,0.454072282934794,0,0,0,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0.427114777637135,0,0,0.103052529238439,1.03056216018252,0.18611685633159,0.506328996723799,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.731842236777572,1.72288698817931,0.580969714347592,1.24393266018445,0.252320850875628,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.404493924480493,0,0.38474715694639,0,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0,1.32438929824395,0.368965315629341,0,0,0,0,0,0,1.03993478527958,0,0.463721619900307,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0.492434012174795,0,0.297262324577456,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,1.86595303986695,2.01767934783746,0.37872730027914,0.063497894292169,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0.358121926479791,0.560425719967636,2.56139988262505,3.45004119775228,3.20857590699371,0.76228387266739,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,2.24702107184155,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0.391602314925481,0,1.44737618286021,2.37285620900479,2.13455115606889,0,0,0.604780586659361,0,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0.541892875087706,0,0.509752546090077,0,0.223874754722178,0.219259876645935,0.261435451024901,0.512900250232778,0,0.325378394664303,0.412164046590889,0.457847324091717,0.247528499761764,0,0,0,0.580024309752732,0.308097234229289,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0.255679882248303,0.534192213880424,0.165284915360978,0,0.382838137483752,0,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0,0.573645408816206,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.564862804660675,0,0,0.443430153536676,0,0.507447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| |||
|short_description=p3@ZXDC | |||
}} |
Latest revision as of 04:21, 20 September 2015
Short description: | p3@ZXDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZXDC_5end |
Coexpression cluster: | NA |
Association with transcript: | -104bp_to_ENST00000389709, NM_001040653, NM_025112, uc003eiv.2, uc003eix.2, uc010hsh.2_5end |
EntrezGene: | ZXDC |
HGNC: | 28160 |
UniProt: | Q2QGD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.58e-19 | 168 |
leukocyte | 8.35e-19 | 136 |
hematopoietic cell | 1.74e-18 | 177 |
hematopoietic oligopotent progenitor cell | 7.95e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.95e-14 | 161 |
nongranular leukocyte | 1.10e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 8.18e-12 | 120 |
CD4-positive, alpha-beta T cell | 4.47e-09 | 6 |
myeloid leukocyte | 2.78e-08 | 72 |
myeloid cell | 3.14e-08 | 108 |
common myeloid progenitor | 3.14e-08 | 108 |
classical monocyte | 5.74e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.74e-08 | 42 |
natural killer cell | 1.49e-07 | 3 |
pro-NK cell | 1.49e-07 | 3 |
granulocyte monocyte progenitor cell | 1.86e-07 | 67 |
plasmacytoid dendritic cell | 3.74e-07 | 3 |
basophil | 4.41e-07 | 3 |
single nucleate cell | 8.41e-07 | 3 |
mononuclear cell | 8.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.86e-08 | 98 |
blood island | 2.86e-08 | 98 |
hemolymphoid system | 6.82e-07 | 108 |
bone marrow | 8.54e-07 | 76 |