FFCP PHASE1:Hg19::chr6:123110302..123110313,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:123110302..123110313,+ to FFCP PHASE1:Hg19::chr6:123110302..123110313,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10924 | |EntrezGene=10924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17389 | |HGNC=17389 | ||
|TSSclassifier=strong | |||
|UniProt=Q92484 | |UniProt=Q92484 | ||
|association_with_transcript=-1bp_to_ENST00000368440_5end | |||
|cluster_id=chr6:123110302..123110313,+ | |||
|coexpression_cluster_id=C2841 | |||
|description=CAGE_peak_4_at_SMPDL3A_5end | |||
|id=chr6:123110302..123110313,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.05e-10!45;CL:0002057!4.17e-10!42 | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.08e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.56e-12!659;UBERON:0000062!8.57e-11!511;UBERON:0001007!3.47e-09!155;UBERON:0001555!3.47e-09!155;UBERON:0007026!3.47e-09!155;UBERON:0000922!2.59e-08!612;UBERON:0002050!3.43e-08!605;UBERON:0005423!3.43e-08!605;UBERON:0004119!3.53e-08!169;UBERON:0000925!3.53e-08!169;UBERON:0006595!3.53e-08!169;UBERON:0000467!5.35e-08!625;UBERON:0000923!5.91e-08!604;UBERON:0005291!5.91e-08!604;UBERON:0006598!5.91e-08!604;UBERON:0002532!5.91e-08!604;UBERON:0000480!7.48e-08!626;UBERON:0004921!2.08e-07!129;UBERON:0004185!2.08e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.74e-11;17!UBERON:0005409;6.25e-10;22!UBERON:0004921;2.10e-08;33!UBERON:0000059;1.03e-07;11!UBERON:0001155;2.80e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.61e-11,17;UBERON:0005409,1.53e-08,25;UBERON:0000059,8.45e-08,11;UBERON:0001155,1.81e-07,9;UBERON:0004921,4.80e-07,118;UBERON:0002367,9.17e-07,11;UBERON:0010147,9.17e-07,11;UBERON:0009846,9.17e-07,11;UBERON:0003353,9.17e-07,11;UBERON:0004902,9.17e-07,11;UBERON:0003820,9.17e-07,11;UBERON:0009847,9.17e-07,11 | |||
|phase1_expression=1.99846217197612,0.642301571672949,1.40954404095971,0,1.34088328328186,0,2.53299878168311,1.89515962028049,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0.410623275218653,0.753255837568817,0,0.0821005894499457,0.0787107813136792,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0,3.87796785972314,3.60980005446255,1.08505435357926,0.671746422719773,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0.232429036905685,1.23350366406548,1.23882548358041,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0.752969358170419,0.545812300115692,0.898893937780338,0.918251677112708,1.28371610830437,0,0.659702600373432,0.199463657621632,1.70489900213078,3.48251086354301,0.56738522469114,2.4912889959823,0,0,0.217188844705117,3.02699751316684,1.10483290796269,2.21523671208619,0.422510572623884,1.27562579979026,0.838634582033504,0.786300418025466,0.300353785683013,0.48217676009124,0.855038231223746,0.99458338599545,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,1.00267582127178,0.724232594804119,0,0,0.378139268656271,0.221729397462564,0.43917392846563,0.785874452986276,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0.756787138224657,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0.516628905878827,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0,0.554128230968366,0,0.612975591598039,0.751190294532984,0.113432183160021,0.179389635688862,0,0.847727604638247,0,0.721367704669072,0,0.18611685633159,0.675105328965065,0.487185025805993,1.00973509697646,0.644349290496095,1.93975268182574,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0.286804595389004,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,2.78620756819187,3.60939740834793,0.473227200159376,0.337169380156203,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0,0,0,1.47008711385542,0,0.982827216677626,2.36315962672562,0,2.09080345523293,0,0,0,0,0,0,0,0,0.231860809950154,0.469634776943287,0,0,0,0,1.71697232418975,0,0,0,0,0,0.425325291727159,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.253991577168676,0,0,0,0.411309970813294,0.600686115687835,0.857479297891735,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.57191197463259,1.08524321078289,0.823240336780769,0,0.710783897485092,0,0.602878754119172,0.871533458600294,0.699810938274399,0,0.502257091432126,0,0,3.44585807502342,0,0.144781306667579,0,0.895304816199478,0,0,0,0,1.01637849688985,2.60279707715243,1.54657762555539,0.167516265334349,1.27587750330633,0,0,0,0.981531933753119,0,0.271265023699736,0.623912584592421,0.356857977594324,0,0.585707074963566,0.300946099727719,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0.215714200818617,0.320182673410333,0,0,0.907170879989041,0.496215615637554,0.61384789315225,1.68396056659844,0.640695746278505,0.511707249066704,0.64341568457443,2.96836132889982,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.966875596732978,0,0,7.00368133804101,2.73136752010076,11.4078241014699,0,0.15403067420883,0,0,0.844413031143006,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,2.06082023295445,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0.190630193923825,0,1.71175595213568,0.636406495851874,0,1.79872457583315,2.74537029736055,1.29593642580255,0.202182481573316,0,0,1.95053495635836,0,0,1.9109987597118,14.1405431953713,0,0,0,0,0,1.31178950409327,0,0,0,0.430234056612155,0.491245205065606,0,0.709522128141196,0.633322905892992,0.329294892959902,0,0.349934720244983,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,0.71623345421307,2.67268212749375,0.614321404198464,0,0.140669416410513,0.333926115068718,4.94411622680279,0,0,0,3.52705846995986,0.102268682502155,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0.969332746095218,0.0927680981618513,0,1.04171104434093,0.437299999980979,0,0.1137934482855,0,0,0,1.16641845353302,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0.83654246567162,1.38510465306835,0.227884111694002,0.69169171316418,0.448788222048861,5.75831071186643,1.91400695839152,0.274792780205587,4.7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| 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| ||
|short_description=p4@SMPDL3A | |||
}} | }} |
Latest revision as of 05:14, 20 September 2015
Short description: | p4@SMPDL3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMPDL3A_5end |
Coexpression cluster: | C2841_sacrococcigeal_CD14_Smooth_colon_Prostate_anaplastic_tridermal |
Association with transcript: | -1bp_to_ENST00000368440_5end |
EntrezGene: | SMPDL3A |
HGNC: | 17389 |
UniProt: | Q92484 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.61e-11 | 17 |
gastrointestinal system | 1.53e-08 | 25 |
large intestine | 8.45e-08 | 11 |
colon | 1.81e-07 | 9 |
subdivision of digestive tract | 4.80e-07 | 118 |
prostate gland | 9.17e-07 | 11 |
male accessory sex gland | 9.17e-07 | 11 |
embryonic cloacal epithelium | 9.17e-07 | 11 |
epithelium of hindgut | 9.17e-07 | 11 |
urogenital sinus epithelium | 9.17e-07 | 11 |
prostate bud | 9.17e-07 | 11 |
prostate field | 9.17e-07 | 11 |